| Gene: Ahcyl1 | ID: uc008qxi.1_intron_0_0_chr3_107468032_r | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.mut |
(13) TESTES |
| AAGTATCTGGGACTCAACAAAAATGGGCCATTCAAACCTAATTATTACAGGTAACTTGAAAGAAAGCAATGAAAAGTTCTTCTTCAATGTTAGACCAACCAGTTTAGCCAGGTCTCTTCAGTAAAGATAAGTGTCATGTCTGATATTTATGAGTATAAGGTCACCACAGCAGGTTAGCAGGGCAATGACTAGGCTGCTCAATATTGAATGCTTGCCTAGTATAGTGAGGTTCAGTCCCCAGCTCTACAGAAAACCAAATTAACAAGGTAGTCAGAGAAAATGTGTATCTACCAATAAATGTAAAGAACTAAGTATCTTAAGGTTTTAGAGAAGGTGAGCCTCACCTCAGGAGAAACCCATGAACGAATCCCCAGTCTGGGCTGGGGGAAGCTTGGGAAGATGCTGTTGGTGATCTCAGAAGGCATGTTTACATGTCTGTCTTTCTCTTTCAGATACTAATGGACATAGTACAGTGACCAGTCCACATGAACCACGCAACTCT .................................................................................................................................................................................................................................................((((....((((((..........(((((.((.......)).....)))))..........((((........))))..))))))...((.((((.....)))))).))))...................................................................................................................................................... ...............................................................................................................................................................................................................................................240..............................................................................................................353................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................................................................................................................................................................CAGTCTGGGCTGGGGGAAGCTTGGGAAGATGCTGTTGGTGATCTCAGAAGGC............................................................................... | 52 | 1 | 95.00 | 95.00 | 95.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................TACAGAAAACCAAATTAACAAGGTAGTCAGAGAAAATGTGTATCTACCAATA.............................................................................................................................................................................................................. | 52 | 1 | 45.00 | 45.00 | - | 45.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................ATTAACAAGGTAGTCAGA................................................................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAATGGACATAGTACAGTGAC......................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTGACCAGTCCACATGAACCACGCA..... | 29 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACCAGTCCACATGAAC........... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGATACTAATGGACATAG.................................. | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................ATGGGCCATTCAAACCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGTGACCAGTCCACATGAACCACGC...... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACCAGTCCACATGAACCACGCAACTC. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................................................................................................................................................................GGTGAGCCTCACCccgc......................................................................................................................................................... | 17 | ccgc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................CTTGGGAAGATGCTGgatt............................................................................................. | 19 | gatt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGACATAGTACAGTGACC........................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| AAGTATCTGGGACTCAACAAAAATGGGCCATTCAAACCTAATTATTACAGGTAACTTGAAAGAAAGCAATGAAAAGTTCTTCTTCAATGTTAGACCAACCAGTTTAGCCAGGTCTCTTCAGTAAAGATAAGTGTCATGTCTGATATTTATGAGTATAAGGTCACCACAGCAGGTTAGCAGGGCAATGACTAGGCTGCTCAATATTGAATGCTTGCCTAGTATAGTGAGGTTCAGTCCCCAGCTCTACAGAAAACCAAATTAACAAGGTAGTCAGAGAAAATGTGTATCTACCAATAAATGTAAAGAACTAAGTATCTTAAGGTTTTAGAGAAGGTGAGCCTCACCTCAGGAGAAACCCATGAACGAATCCCCAGTCTGGGCTGGGGGAAGCTTGGGAAGATGCTGTTGGTGATCTCAGAAGGCATGTTTACATGTCTGTCTTTCTCTTTCAGATACTAATGGACATAGTACAGTGACCAGTCCACATGAACCACGCAACTCT .................................................................................................................................................................................................................................................((((....((((((..........(((((.((.......)).....)))))..........((((........))))..))))))...((.((((.....)))))).))))...................................................................................................................................................... ...............................................................................................................................................................................................................................................240..............................................................................................................353................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ..........................................................................................................................................................................................................................................................................................................................................................................................................GGAAGATGCTGTTGG............................................................................................. | 15 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |