(1)
OTHER.ip
(7)
OTHER.mut
(2)
OVARY
(3)
PIWI.ip
(2)
PIWI.mut
(26)
TESTES

Sense strand
GGCCTCCAGGTACCGGCAAGACTGTCACATTAGTGGAGGCCATCAAACAGGTGAGGCTGCAGCCCCCAGCATATGTCTGCAATTATATTGCTTCCAGCGAGCTGAATGTGCCTATACTTGAACAGTCACCCAAAGAGGAAGTAGGGATTAGAGTCATGAGTATTGGTGTGTATATATGCAGACGAGAATTTACTGATATCCAGCACCAAGGTGTCATCAGGACTAGCAGACATCTGGAAGGCAAACGCAGTCTGAGTCCCATGTCATAGAGCACGTCTGCCCAGTCTGTCTTTTTTTTCTCAGGTAGTGAAGCATTTGCCCAAAGCCCACATCCTGGCCTGTGCTCCATCCAA
.................................................................................................................................((.....)).....((((((((((((((((((.((.((.((((....)))).)).)).))))).)))).....((.((.(((((((.............)))))))))...))........))))).)))).............................................................................................
.........................................................................................................................122...........................................................................................................................................264.......................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037897(GSM510433)
ovary_rep2. (ovary)
SRR037903(GSM510439)
testes_rep4. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
..................................................................................................................................................................................................................................................AAACGCAGTCTGAGTgga............................................................................................. 18 gga 7.00 0.00 1.00 1.00 - - - - 3.00 - - - - - - - - - - - 1.00 - - - - - - - 1.00 -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGcgga............................................................................................. 17 cgga 5.00 0.00 3.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................ACGCAGTCTGAGcgga............................................................................................. 16 cgga 4.00 0.00 3.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TCATCAGGACTAGCAGAC.......................................................................................................................... 18 1 3.00 3.00 - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGTggc............................................................................................. 17 ggc 3.00 0.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................TGGAAGGCAAACGCAGTCTGAGTCCC............................................................................................. 26 1 3.00 3.00 - - - - - - - 3.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................ATCAGGACTAGCAGACATCTGGAAGGC............................................................................................................... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................TCTGGAAGGCAAACGCAG....................................................................................................... 18 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................ACGCAGTCTGAGTgta............................................................................................. 16 gta 2.00 0.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................TTGCTTCCAGCGAGCTGAATGTGCCT................................................................................................................................................................................................................................................ 26 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................TCAGGACTAGCAGACATCTGGAAGGC............................................................................................................... 26 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - -
..............................................................................................................................CACCCAAAGAGGAAGTAGGGATTAGAGT....................................................................................................................................................................................................... 28 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................ACGCAGTCTGAGTggc............................................................................................. 16 ggc 2.00 0.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................TCTGAGTCCCATGTCATAGAG.................................................................................. 21 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - -
..........TACCGGCAAGACTGTCACATTAGTG.............................................................................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...............................................................................................................................................................................................................................TAGCAGACATCTGGAAGGCAAACGCAGT...................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................AGCACCAAGGTGTCATCAGGACTAGCAGA........................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................GGACTAGCAGACATCTGGAAGGCAAACGCAGT...................................................................................................... 32 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................ACATTAGTGGAGGCCATCAAACAGGTa............................................................................................................................................................................................................................................................................................................ 27 a 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...CTCCAGGTACCGGCAAGACTGTCACATTt................................................................................................................................................................................................................................................................................................................................. 29 t 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
........................................................................................................................................................................................................................................TCTGGAAGGCAAACGCAGTCTGAGTC............................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
......CAGGTACCGGCAAGACTGTCAC..................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........ACCGGCAAGACTGTCACATT.................................................................................................................................................................................................................................................................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
..........TACCGGCAAGACTGTCACATTAGTGGA............................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGcgg.............................................................................................. 16 cgg 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................ATACTTGAACAGTCACCCAAAGAGGAAGTAGG................................................................................................................................................................................................................ 32 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................GGTGTCATCAGGACTAGCAG............................................................................................................................ 20 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................TGCAGACGAGAATTTACTGATATCCAG...................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................GCGAGCTGAATGTGCCTATACTTGAA....................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGTgta............................................................................................. 17 gta 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGGCTGCAGCCCCCAGCATATGT..................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
......CAGGTACCGGCAAGACTc......................................................................................................................................................................................................................................................................................................................................... 18 c 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................CAAACGCAGTCTGAGTgga............................................................................................. 19 gga 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..........TACCGGCAAGACTGTCACATTAGTGGAGGC......................................................................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.......................................................................................................................................................................................................................ATCAGGACTAGCAGACATCTGG.................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGTtga............................................................................................. 17 tga 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................GACATCTGGAAGGCAAACGCAGT...................................................................................................... 23 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGTgaa............................................................................................. 17 gaa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TTCCAGCGAGCTGAATGTGCCTATACTT.......................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGTggt............................................................................................. 17 ggt 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................ACGCAGTCTGAGggga............................................................................................. 16 ggga 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................TCAGGACTAGCAGACATCTGGAAGGCAAACGCA........................................................................................................ 33 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGTggag............................................................................................ 18 ggag 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
..........................................................................................................................................................................................................................AGGACTAGCAGACATCTG..................................................................................................................... 18 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................AGGACTAGCAGACATCTGGAAGGC............................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................TCTGAGTCCCATGTCATAGAGCACGTC............................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
..............GGCAAGACTGTCACATTA................................................................................................................................................................................................................................................................................................................................. 18 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................AGGACTAGCAGACATCTGGAAGGCA.............................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.....................................................................................................CTGAATGTGCCTATACTTG......................................................................................................................................................................................................................................... 19 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................AGTAGGGATTAGAGTCATGAGTATTGGT.......................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
......................................................................................................TGAATGTGCCTATACTTGAACAGTCAC................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
........................................................................................................................AACAGTCACCCAAAGAGGAAGTAGGGATa............................................................................................................................................................................................................ 29 a 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................TATATGCAGACGAGAATTTACTGATA........................................................................................................................................................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................AAGTAGGGATTAGAGTCATGAGTATTGGTGTG....................................................................................................................................................................................... 32 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................AAGTAGGGATTAGAGTCATGAGTATT............................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................TATATGCAGACGAGAATTTACTGATATCCA....................................................................................................................................................... 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................AACGCAGTCTGAGggga............................................................................................. 17 ggga 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................GTAGGGATTAGAGTCATGAGTATTGGTG......................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................AAAGAGGAAGTAGGGATTAGAGTCAT.................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................................................................................AGCGAGCTGAATGTGCCTATACTTG......................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.......................................................................................................................................AGGAAGTAGGGATTAGAGTCAT.................................................................................................................................................................................................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................GTAGGGATTAGAGTCATGAGTAT.............................................................................................................................................................................................. 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................GTGGAGGCCATCAAACAG............................................................................................................................................................................................................................................................................................................... 18 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - -

Antisense strand
GGCCTCCAGGTACCGGCAAGACTGTCACATTAGTGGAGGCCATCAAACAGGTGAGGCTGCAGCCCCCAGCATATGTCTGCAATTATATTGCTTCCAGCGAGCTGAATGTGCCTATACTTGAACAGTCACCCAAAGAGGAAGTAGGGATTAGAGTCATGAGTATTGGTGTGTATATATGCAGACGAGAATTTACTGATATCCAGCACCAAGGTGTCATCAGGACTAGCAGACATCTGGAAGGCAAACGCAGTCTGAGTCCCATGTCATAGAGCACGTCTGCCCAGTCTGTCTTTTTTTTCTCAGGTAGTGAAGCATTTGCCCAAAGCCCACATCCTGGCCTGTGCTCCATCCAA
.................................................................................................................................((.....)).....((((((((((((((((((.((.((.((((....)))).)).)).))))).)))).....((.((.(((((((.............)))))))))...))........))))).)))).............................................................................................
.........................................................................................................................122...........................................................................................................................................264.......................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR037897(GSM510433)
ovary_rep2. (ovary)
SRR037903(GSM510439)
testes_rep4. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
.............................................................................................................................................................................GCAGACGAGAATTcacg................................................................................................................................................................... 17 cacg 3.00 0.00 - - 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................GCAGACGAGAATTcac................................................................................................................................................................... 16 cac 3.00 0.00 - - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................GTCTGCCCAGTCTGTCTTTTTTTTC...................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -