| Gene: Wdr3 | ID: uc008qqo.1_intron_8_0_chr3_99947751_r | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(14) TESTES |
| AGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCTGGAGGTAACCCCTTGCTTGTTTGGCTTGATTGGTACTTGCCTTAGTTAAGGTTCTTATACCTGTGAAGAGGCATTGTGAACATGGCAACTCTTATAAAGGAAAACATTTAATTTGGGCTGGCTTATAGTTCAGAGGTAGAGCCCAATGTCACGGTGGGAAGCATGGTGGCACGCAGGCAGGTATGATGATGGACAGGTAGCTGAGAGTTCTACATCTGGAACCACAGGCAGCAGGAAAAGAACTGAGAGCCACTAGGCCTGGTTTGATCTTCTGAGACTTCCAAATCTACCCACTAGTGACATACTTTGTTCAATAAGGCCATGCGTCTTAGTACTGCCGTTTCCTATGGGTCTATGGGGGACATTTTTATTCTAACCACCACAGTAACTTTAAAAACTTCCTTTAAGAATATTTACCCTACCACTGGCATAAACGAGTGGTAACCAATGAGTAAGTTAGATTTCCTTGGGTCATTTTGTTTTATCTGTGTCCAGGGACACCACCAGGAAATATGGTGTTTGGCTGTCAGCCCCAGTGGAGACTA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014236(GSM319960) 10 dpp total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................GTATGATGATGGACAGGTAGCTGAGA................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 12.00 | 12.00 | 6.00 | 3.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................TAGCTGAGAGTTCTACATCTGGAgta.................................................................................................................................................................................................................................................................................................................................. | 26 | gta | 7.00 | 0.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TATGATGATGGACAGGTAGCTGAGA................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 4.00 | 4.00 | - | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................AGGTATGATGATGGACAGGTAGCTGAGA................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................GTATGATGATGGACAGG............................................................................................................................................................................................................................................................................................................................................................ | 17 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TCTTATAAAGGAAAACATTTAATTTGagc........................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTGGCTGTCAGCCC............ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................TGCAGACAAGTTTGAGCACATCCAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................................................................................................................................................................TTGATCTTCTGAGAaggg........................................................................................................................................................................................................................................................................ | 18 | aggg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................TCAATAAGGCCATGCagg......................................................................................................................................................................................................................... | 18 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATGGTGTTTGGCTGTCAGCCCC........... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......AGCAGTGGGATGCAGACAAGTgt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 23 | gt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................AGGTATGATGATGGACAGGTAGCTGAGAGTTa............................................................................................................................................................................................................................................................................................................................................... | 32 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......AGCAGTGGGATGCAGACAAGTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................GCATTGTGAACATGGCAACTCTTATAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TAAAGGAAAACATTTAATTTGGGCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 11 | 0.09 | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.09 |
| AGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCTGGAGGTAACCCCTTGCTTGTTTGGCTTGATTGGTACTTGCCTTAGTTAAGGTTCTTATACCTGTGAAGAGGCATTGTGAACATGGCAACTCTTATAAAGGAAAACATTTAATTTGGGCTGGCTTATAGTTCAGAGGTAGAGCCCAATGTCACGGTGGGAAGCATGGTGGCACGCAGGCAGGTATGATGATGGACAGGTAGCTGAGAGTTCTACATCTGGAACCACAGGCAGCAGGAAAAGAACTGAGAGCCACTAGGCCTGGTTTGATCTTCTGAGACTTCCAAATCTACCCACTAGTGACATACTTTGTTCAATAAGGCCATGCGTCTTAGTACTGCCGTTTCCTATGGGTCTATGGGGGACATTTTTATTCTAACCACCACAGTAACTTTAAAAACTTCCTTTAAGAATATTTACCCTACCACTGGCATAAACGAGTGGTAACCAATGAGTAAGTTAGATTTCCTTGGGTCATTTTGTTTTATCTGTGTCCAGGGACACCACCAGGAAATATGGTGTTTGGCTGTCAGCCCCAGTGGAGACTA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014236(GSM319960) 10 dpp total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................................GCTGAGAGTTCTACATCTGGAACCACA............................................................................................................................................................................................................................................................................................................................... | 27 | 2 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................AGAGGCATTGTGAACATGGCAACTCTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................TGGCTTATAGTTCAGagaa............................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | agaa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................ATGGCAACTCTTATAAAGGAAAAcagg......................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | cagg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................GCTGAGAGTTCTACATCTGGAACCACAGGCA........................................................................................................................................................................................................................................................................................................................... | 31 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................CATCTGGAACCACAGGCAGC......................................................................................................................................................................................................................................................................................................................... | 20 | 3 | 0.33 | 0.33 | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................AGCTGAGAGTTCTACATCTGGAACCA................................................................................................................................................................................................................................................................................................................................. | 26 | 3 | 0.33 | 0.33 | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - |