| Gene: AK015488 | ID: uc008qmt.1_intron_2_0_chr3_96155427_r.5p | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(1) OVARY |
(7) PIWI.ip |
(2) PIWI.mut |
(24) TESTES |
| GCGGGTCCCGGGGTAGTTGGGGACGTTGGGGACGCTACCTGAGTGGGCAGGTGAGTGGCGGTGGTGACCAGTAGAAGGCAGGCGACTCTTAGGACTGAGAAACTGGAACCCCATGTTGGGAGGGATTAATATGCAAATTTGCCAAATTGACGGCTACTGTTCTCGGTGTCAGGATTCAGTTTCTGGGATGTTGGGAGTTAGGCCACAAAAATGAACCATCCCCAGAACCCCCACCCCCCCTCTCCCCCTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................TAGGACTGAGAAACTGGAACCCCATG....................................................................................................................................... | 26 | 2 | 4.00 | 4.00 | 0.50 | 0.50 | 1.00 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| .........................................................................................TAGGACTGAGAAACTGGAACCCCATGTT..................................................................................................................................... | 28 | 2 | 2.00 | 2.00 | - | - | 1.00 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TAGGACTGAGAAACTGGAACCCCATGT...................................................................................................................................... | 27 | 2 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TGAGAAACTGGAACCCCATGTTGGGAGG............................................................................................................................... | 28 | 2 | 2.00 | 2.00 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................TAGAAGGCAGGCGACTCTTAGGACTG......................................................................................................................................................... | 26 | 2 | 2.00 | 2.00 | 1.00 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................CGGCTACTGTTCTCGGTGTCAGG............................................................................. | 23 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GGTAGTTGGGGACtgcg.............................................................................................................................................................................................................................. | 17 | tgcg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TTAGGACTGAGAAACTGGAACCCCATG....................................................................................................................................... | 27 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGCAAATTTGCCAAATTGACGGCTACTG........................................................................................... | 28 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................CAGGCGACTCTTAGGACTGAGAAACTGGA............................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TGCCAAATTGACGGCTACTGTTCTCGGT................................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................GAAGGCAGGCGACTCTTAGGACTGAGAAAC................................................................................................................................................... | 30 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................GCAGGCGACTCTTAGGACTGAGAAACT.................................................................................................................................................. | 27 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TTCAGTTTCTGGGATGTTGGGAGTT................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .............................................................TGGTGACCAGTAGAAGGCAGGCGA..................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................AGGACTGAGAAACTGGAACCCCATGTT..................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGGGATGTTGGGAGTTAGGCCACAAA......................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGTTCTCGGTGTCAGGATTCAGTTTC................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ......................................................................................................................................................................................................TAGGCCACAAAAATGAACCATCCCCAGA........................ | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGTTCTCGGTGTCAGGATTCAGTTT.................................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ...........................................................................................................................................TGCCAAATTGACGGCTACTGTTCTC...................................................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TGAGAAACTGGAACCCCATGTTGGGAG................................................................................................................................ | 27 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TCAGGATTCAGTTTCTGGGATGTTGGGAG..................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................GGCAGGCGACTCTTAGGACTGAGAAAC................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCTCGGTGTCAGGATTCAGTTTCT.................................................................. | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................TGTTGGGAGGGATTAATATGCAAAT................................................................................................................ | 25 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................AGGACTGAGAAACTGGAACCCCATGTTGGGA................................................................................................................................. | 31 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGCAAATTTGCCAAATTGACGGCTACTGT.......................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................CAGTTTCTGGGATGTTGGGAGTTAGGC............................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................GGATTCAGTTTCTGGGATGTTGGG....................................................... | 24 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCTCGGTGTCAGGATTCAGTTTCTGGG............................................................... | 27 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................CGACTCTTAGGAC........................................................................................................................................................... | 13 | 12 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| GCGGGTCCCGGGGTAGTTGGGGACGTTGGGGACGCTACCTGAGTGGGCAGGTGAGTGGCGGTGGTGACCAGTAGAAGGCAGGCGACTCTTAGGACTGAGAAACTGGAACCCCATGTTGGGAGGGATTAATATGCAAATTTGCCAAATTGACGGCTACTGTTCTCGGTGTCAGGATTCAGTTTCTGGGATGTTGGGAGTTAGGCCACAAAAATGAACCATCCCCAGAACCCCCACCCCCCCTCTCCCCCTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | mjTestesWT2() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................GACGGCTACTGTTCTCGGTGTCAGGA............................................................................ | 26 | 2 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | 0.50 | - | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| ................................................................................................................................................AATTGACGGCTACTGTTCTCGGTGTCA............................................................................... | 27 | 2 | 2.00 | 2.00 | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | 0.50 | - | - |
| .................................................................................................................................................ATTGACGGCTACTGTTCTCGGTGTCA............................................................................... | 26 | 2 | 1.50 | 1.50 | - | - | - | - | - | 0.50 | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................GACCAGTAGAAGGCAGGCGACTCTTA............................................................................................................................................................... | 26 | 2 | 1.00 | 1.00 | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................AAGGCAGGCGACttg.................................................................................................................................................................... | 15 | ttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................CCCCCACCCCCCCTCccat........ | 19 | ccat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGACGGCTACTGTTCTCGGTGTCAGGAT........................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AAATTGACGGCTACTGTTCTCGGTGTCA............................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................GGCTACTGTTCTCGGTGTCAGGATTCA........................................................................ | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................GGGCAGGTGAGTGGCGGTGGTGACCAGTA................................................................................................................................................................................. | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TTGACGGCTACTGTTCTCGGTGTCA............................................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................CGGCTACTGTTCTCGGTGTCAGGA............................................................................ | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ....................................................................CAGTAGAAGGCAGGCGACTCTTAGGA............................................................................................................................................................ | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ...............GTTGGGGACGTTGGGGACGCTACCTGA................................................................................................................................................................................................................ | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TCTGGGATGTTGGGAGTTAGGCCACAA.......................................... | 27 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................ACGGCTACTGTTCTCGGTGTCAGGATTCA........................................................................ | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GACGGCTACTGTTCTCGGTGTCAGG............................................................................. | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGACGGCTACTGTTCTCGGTGTCAGGA............................................................................ | 27 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................CCCAGAACCCCCACCCCCCCT......... | 21 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GACGGCTACTGTTCTCGGTGTCAGGATTCA........................................................................ | 30 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |