(3)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(2)
PIWI.mut
(17)
TESTES

Sense strand
TGACTCTTAGGTGACAAGACTGGTAGATCAAACGGAAACAAATGTTTTTACATTTATTTTGTGTATATGTGGTAGTGGGGCATGCCTGGGTGCGCATGTATAGAGGTCAGAAGACAAGGTGTGCTCACGCTCCTCCTAGAACTCTAACATCATCTCTCATCGATCTTCAACTGCTGCCTCCACTCCCCATGGACTCCCAGCTGCTCCTGTGCTTCAGATGGATCCTGCTCCGGCTCCTGCAAATGCACCT


Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
................................................................................................TGTATAGAGGTCAGAAGACAAGGTGTG............................................................................................................................... 27 1 5.00 5.00 3.00 1.00 - - - - - 1.00 - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCTTCAGATGGATCCTGCTCCGG................. 26 1 5.00 5.00 1.00 - 2.00 - - - - - - - - 1.00 - - 1.00 - - -
................................................................................................TGTATAGAGGTCAGAAGACAAGGTG................................................................................................................................. 25 1 4.00 4.00 - 2.00 - - 2.00 - - - - - - - - - - - - -
....................................................................................................TAGAGGTCAGAAGACAAGGTGTGCTC............................................................................................................................ 26 1 3.00 3.00 2.00 - - - - - - - - 1.00 - - - - - - - -
....................TGGTAGATCAAACGGAAACAAATGTTT........................................................................................................................................................................................................... 27 1 3.00 3.00 - 2.00 - - - - - - - - - - 1.00 - - - - -
...........TGACAAGACTGGTAGATCAAACGGAAA.................................................................................................................................................................................................................... 27 1 3.00 3.00 3.00 - - - - - - - - - - - - - - - - -
.................................................................TATGTGGTAGTGGGGCATGCCTGt................................................................................................................................................................. 24 t 2.00 0.00 - - - - - - - - 2.00 - - - - - - - - -
....................TGGTAGATCAAACGGAAACAAATGTTTT.......................................................................................................................................................................................................... 28 1 2.00 2.00 - - - - - - 1.00 - - - - - - - - - 1.00 -
.........................................................................................................................................................................................................TGCTCCTGTGCTTCAGATGGATCCTGC...................... 27 1 2.00 2.00 - - - - - - - - - 2.00 - - - - - - - -
............GACAAGACTGGTAGATCAAACGGAAA.................................................................................................................................................................................................................... 26 1 2.00 2.00 1.00 - - - - - - 1.00 - - - - - - - - - -
...........TGACAAGACTGGTAGATCAAACGGAAAC................................................................................................................................................................................................................... 28 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - -
..................ACTGGTAGATCAAACGGAAACAAATGT............................................................................................................................................................................................................. 27 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - -
......................................................TATTTTGTGTATATGTGGTAGTGGG........................................................................................................................................................................... 25 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - -
........AGGTGACAAGACTGGTAGATCAAACGG....................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - -
....................TGGTAGATCAAACGGAAACAAATGTT............................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - -
...........................................................................................GCGCATGTATAtgag................................................................................................................................................ 15 tgag 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCTTCAGATGGATCCTGCTCCGGCT............... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - -
....................TGGTAGATCAAACGGAAACAAATGTTTTT......................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - -
................................................................................................................................................TAACATCATCTCTCATCGATCTTCAA................................................................................ 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - -
........................................................TTTTGTGTATATGTGGTAGTGGGGC......................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - -
...............................................................................................................................................................................................................TGTGCTTCAGATGGATCCTGCTCCG.................. 25 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - -
......................................................TATTTTGTGTATATGTGGTAGTGGGGg......................................................................................................................................................................... 27 g 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCTTCAGATGGATCCTGCTCCGGCTC.............. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................TAGAACTCTAACATCATCTCTCATCGAT...................................................................................... 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - -
......TTAGGTGACAAGACTGGTAGATCAAACG........................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - -
........................................................................................................................................TAGAACTCTAACATCATCTCTCATCGA....................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................TCTCTCATCGATCTTCAACTGCTGCCT....................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - -
......................................................TATTTTGTGTATATGTGGTAGTGGGGC......................................................................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
.....CTTAGGTGACAAGACTGGTAGATCAAACGGAAA.................................................................................................................................................................................................................... 33 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - -
......................................................TATTTTGTGTATATGTGGTAGTGGGG.......................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
...........TGACAAGACTGGTAGATCAAACGGAA..................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - -
...............................................................................................................................................................................................................TGTGCTTCAGATGGATCCTGCTCCGGC................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00
....................TGGTAGATCAAACGGAAACAAATGT............................................................................................................................................................................................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
.............ACAAGACTGGTAGATCAAACGGAAAC................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
......TTAGGTGACAAGACTGGTAGATCAAACGG....................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - -
.........GGTGACAAGACTGGTAGATCAAACGGA...................................................................................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -

Antisense strand
TGACTCTTAGGTGACAAGACTGGTAGATCAAACGGAAACAAATGTTTTTACATTTATTTTGTGTATATGTGGTAGTGGGGCATGCCTGGGTGCGCATGTATAGAGGTCAGAAGACAAGGTGTGCTCACGCTCCTCCTAGAACTCTAACATCATCTCTCATCGATCTTCAACTGCTGCCTCCACTCCCCATGGACTCCCAGCTGCTCCTGTGCTTCAGATGGATCCTGCTCCGGCTCCTGCAAATGCACCT


Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)