| Gene: AK040387 | ID: uc008qfx.1_intron_1_0_chr3_94174339_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(17) TESTES |
| TTTGCCTGCATGTTTATTTGTGCACCATTTGTGTGTTTGGTTCACTATGCAGGAAAGAAAAAGATATCAGGTGCCCTGGAACTGGAGTCATACATGACTGTGAGCCACTGTGTGGATGCTGGGAATTGAACCTGGGTTCTTCTGGAAGAGCAGCCTGTGCTCTTAACTGCTGAACCCCGCCCCTCCTCTCATTTTCCTAGGGTGACCTCCAACTCACAACATTGCCTTGGGTGTGCTGGGGTTACAGACC .....................................................................................(((((....)))))..((((((((((.......((((((...((((....))))))))))....))))..)).))))........................................................................................ .....................................................................................86.................................................................................169............................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................TGGAACTGGAGTCATACATGACTGTGAGC................................................................................................................................................. | 29 | 1 | 7.00 | 7.00 | 5.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................TGGGAATTGAACCTGGGTTCTTCTGGAA....................................................................................................... | 28 | 1 | 5.00 | 5.00 | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................TTCTTCTGGAAGAGCAGCCTGTGCTCTTA..................................................................................... | 29 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGCTCTTAACTGCTGAACCCCG....................................................................... | 22 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................TGTGCTCTTAACTGCTGAACCCCGCCCCa.................................................................. | 29 | a | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TGGGAATTGAACCTGGGTTCTTCTGGA........................................................................................................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGGATG.................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACCTGGGTTCTTCTGGAAGAGCAGC................................................................................................ | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TGCAGGAAAGAAAAAGATATCAGGTGCC............................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGG....................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TGCTCTTAACTGCTGAAaaaa........................................................................ | 21 | aaaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................................TGTGCTCTTAACTGCTGAACCCCGCC..................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................TTTGTGTGTTTGGTTCACTATGCAGGta................................................................................................................................................................................................... | 28 | ta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGGAGTCATACATGACTGTGAGCCACTGTa.......................................................................................................................................... | 30 | a | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................TGGGTTCTTCTGGAAGAGCAGCCTGTGC.......................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TTAACTGCTGAACCCCGCCCCTCCTCTCA........................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGATGCTGGGAATTGAACCTcta.................................................................................................................. | 24 | cta | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGGAT..................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................TGACTGTGAGCCACTGTGTGGATGCTt................................................................................................................................. | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................TGTGCTCTTAACTGCTGAACCCCGCa..................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TCACAACATTGCCTTGGGTGTGCTG............ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................ATGACTGTGAGCCACTGTGTGGATGC................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TGGAACTGGAGTCATACATGACTGTG.................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TAACTGCTGAACCCCGCCCCTCCTCTC............................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................TGGAGTCATACATGACTGTGAGCCACTGT........................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGATGCTGGGAATTGAACCTGGGaa................................................................................................................ | 26 | aa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGTGGATGCTGGGAATTGgaa....................................................................................................................... | 21 | gaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGGATGC................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................AACTGGAGTCATACATGACTGTGAGC................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TATGCAGGAAAGAAAAAGATATCAGGTGC................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGTGGATGCTGGGAATTGAACCaga................................................................................................................... | 25 | aga | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGGATGgta................................................................................................................................. | 31 | gta | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................GTGGATGCTGGGAATTGAAaaa..................................................................................................................... | 22 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................TTGGTTCACTATGCAGGAAAGAAAAAGA.......................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................GAACTGGAGTCATACATGACTGTGAGC................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGGATGCTa................................................................................................................................. | 31 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TCCAACTCACAACATTGCCTTGGGTGc................ | 27 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................TGGAACTGGAGTCATACATGACTGTGAG.................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TCTTAACTGCTGAACCCCGCC..................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGTGGATGCTGGGAATTGAACCTGaata................................................................................................................ | 28 | aata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................TGGGAATTGAACCTGGGTTCTTCTGG......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................GGGAATTGAACCTGGGTTCTTCTGGAA....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TTGTGTGTTTGGTTCACTATGCAGGAA................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................GCCACTGTGTGGATGCTGGGAATTGAACCTGGGTTCTT............................................................................................................. | 38 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TGGATGCTGGGAATTGAACCTGGGga................................................................................................................ | 26 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................TACATGACTGTGAGCCACTGTGTGGA...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGTGGATGCTGGGAATTGAAtgaa.................................................................................................................... | 24 | tgaa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCTTCTGGAAGAGCAGCCTGTGCTCTT...................................................................................... | 27 | 3 | 0.33 | 0.33 | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - |
| TTTGCCTGCATGTTTATTTGTGCACCATTTGTGTGTTTGGTTCACTATGCAGGAAAGAAAAAGATATCAGGTGCCCTGGAACTGGAGTCATACATGACTGTGAGCCACTGTGTGGATGCTGGGAATTGAACCTGGGTTCTTCTGGAAGAGCAGCCTGTGCTCTTAACTGCTGAACCCCGCCCCTCCTCTCATTTTCCTAGGGTGACCTCCAACTCACAACATTGCCTTGGGTGTGCTGGGGTTACAGACC .....................................................................................(((((....)))))..((((((((((.......((((((...((((....))))))))))....))))..)).))))........................................................................................ .....................................................................................86.................................................................................169............................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................AGTCATACATGACTGaccc...................................................................................................................................................... | 19 | accc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |