| Gene: AK040387 | ID: uc008qfx.1_intron_0_0_chr3_94172771_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(5) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| ACTCAAATACATTCTTATGCAAGGAAGAGGCTGATAGGGATCAGAGAATCACTCTACCCCACGTGCCCAGTCCTCTTATCAGGCCCAGGAATCTCAAAGCAGGGGGCAAACAACCTGGAGGTGGGTGGTGGCGGCGGCTTGGAAATGGGGAGCAGTCACCAACTCTTCTTTCCCTTCCTCCCCACCCCTTAAAACCGCAGAAACCACTTAAAGCTCAGCACAGTCCTGTCCTTCCAGGGAGGACCCAAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................TCAGGCCCAGGAATCTCAAAGCAGG................................................................................................................................................... | 25 | 1 | 7.00 | 7.00 | 4.00 | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................TATCAGGCCCAGGAATCTCAAAGCAGG................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................TTAAAACCGCAGAAACCACTTAAAGCTC.................................. | 28 | 1 | 4.00 | 4.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................TATCAGGCCCAGGAATCTCAAAGCAG.................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..............................................................................TCAGGCCCAGGAATCTCAAAGCAGGGa................................................................................................................................................. | 27 | a | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................AGGCCCAGGAATCTCAAAGCAG.................................................................................................................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ...........................................................................TTATCAGGCCCAGGAATCTCAAAGCAGG................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................GCAGAAACCACTTAAAGCTC.................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................TGCAAGGAAGAGGCTGATAGGGATC................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................TGATAGGGATCAGAGAATCACTCTACCCC.............................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TATCAGGCCCAGGAATCTCAAAGCA..................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TAAAACCGCAGAAACCACTTAAAGCTC.................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............TCTTATGCAAGGAAGAGGCTGATAGG.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................TGATAGGGATCAGAGAATCACTCTACCCCAC............................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TCAGGCCCAGGAATCTCAAAGCAGGGG................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TCTTATCAGGCCCAGGAATCTCAAAG....................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TTATGCAAGGAAGAGGCTGATAGGGATC................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TCAGGCCCAGGAATCTCAAAGCAGGG.................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................TATCAGGCCCAGGAATCTCAAAGCAGGt.................................................................................................................................................. | 28 | t | 1.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............TTATGCAAGGAAGAGGCTGATAGGG................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TTATGCAAGGAAGAGGCTGATAGG.................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................AGGCCCAGGAATCTCAAAGCAGG................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTAAAACCGCAGAAACCACTTAAAGC.................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TTAAAACCGCAGAAACCACTTAAAGCTg.................................. | 28 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ACTCAAATACATTCTTATGCAAGGAAGAGGCTGATAGGGATCAGAGAATCACTCTACCCCACGTGCCCAGTCCTCTTATCAGGCCCAGGAATCTCAAAGCAGGGGGCAAACAACCTGGAGGTGGGTGGTGGCGGCGGCTTGGAAATGGGGAGCAGTCACCAACTCTTCTTTCCCTTCCTCCCCACCCCTTAAAACCGCAGAAACCACTTAAAGCTCAGCACAGTCCTGTCCTTCCAGGGAGGACCCAAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................CCTCTTATCAGGCCCAGGAATCTCAAA........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............CTTATGCAAGGAAGAGGCTGATAGGGA.................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TCTACCCCACGTGCCCAGTCCTCTTA............................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................ATGGGGAGCAGTCACCAACTCTTCTTTC.............................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |