| Gene: Gatad2b | ID: uc008qca.1_intron_1_0_chr3_90128017_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(19) TESTES |
| TTTGAAGTTTGTTTTTATTGCTGAAGTTGACTGGAGAAATACTTAATATAGATGTCGTTGGACAGTAATAGCATTGGGAGTTAGCTCTGTTATCTGTAAGTTTAAATGTATGTTACATAAATTATTTTTTCTTTACCTCAGCATTTCTTTCACTTCACATTCCTACATGAGGAACTTTATTCTGATATTTCATTCCATAGGATGGATAGAATGACAGAAGATGCTCTGCGCCTGAATCTTTTGAAGAGGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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| ..................................................................................................AGTTTAAATGTATGTTACATAAATTATTTTTTCTTTACCTCAGCATTTCTTT.................................................................................................... | 52 | 1 | 33.00 | 33.00 | 33.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGGATAGAATGACAGAAGATGCTCTGC..................... | 27 | 1 | 16.00 | 16.00 | - | 4.00 | 1.00 | 5.00 | 5.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGACAGAAGATGCTCTGCGCCTGAATC............ | 27 | 1 | 7.00 | 7.00 | - | 1.00 | 4.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGATGGATAGAATGACAGAAGATGCT......................... | 26 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TAGAATGACAGAAGATGCTCTGCGCCTG................ | 28 | 1 | 4.00 | 4.00 | - | 1.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGATGGATAGAATGACAGAAGATGCTC........................ | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TAGAATGACAGAAGATGCTCTGCGCCT................. | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................................................................................TGGATAGAATGACAGAAGATGCTCTG...................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................................................................AGAATGACAGAAGATGCTCTGCGCCTG................ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................ATAGAATGACAGAAGATGCTCTGCGCCT................. | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGATGGATAGAATGACAGAAGATGCTCT....................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TAGAATGACAGAAGATGCTCTGCGCCTGA............... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................ATGCTCTGCGCCTGAATCTT.......... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AGAATGACAGAAGATGCTCTGCGCCT................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................CAGAAGATGCTCTGCGCCTGAATCTTT......... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................GAAGATGCTCTGCGCCTGAAT............. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGGATAGAATGACAGAAGATGCTCTGCGCC.................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................................................TGACAGAAGATGCTCTGCGCCTGAAT............. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................CAGAAGATGCTCTGCGCCTGAAT............. | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGATGGATAGAATGACAGAAGATGCTCTGC..................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................ATGCTCTGCGCCTGAATCTTTT........ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TAGAATGACAGAAGATGCTCTGCGCC.................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................ATGGATAGAATGACAGAAtt............................. | 20 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................................AATGACAGAAGATGCTCTGCGCCTGAATCT........... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AGATGCTCTGCGCCTGAATCT........... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGATGGATAGAATGACAGAAGATGCTCTG...................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TGGATAGAATGACAGAAGATGCTCTGCGC................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GATGGATAGAATGACAGAAGA............................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................GATGTCGTTGGAtaaa........................................................................................................................................................................................ | 16 | taaa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGATGGATAGAATGACAGAAGATGC.......................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ATGACAGAAGATGCTCTGCG.................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| TTTGAAGTTTGTTTTTATTGCTGAAGTTGACTGGAGAAATACTTAATATAGATGTCGTTGGACAGTAATAGCATTGGGAGTTAGCTCTGTTATCTGTAAGTTTAAATGTATGTTACATAAATTATTTTTTCTTTACCTCAGCATTTCTTTCACTTCACATTCCTACATGAGGAACTTTATTCTGATATTTCATTCCATAGGATGGATAGAATGACAGAAGATGCTCTGCGCCTGAATCTTTTGAAGAGGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) |
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