| Gene: Ube2q1 | ID: uc008qad.1_intron_8_0_chr3_89584870_f | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| CCCTTTGACCCACCGTTCGTCAGGGTTGTGTCTCCAGTCCTCTCTGGAGGGTGAGTGGCTGGGCAGAGGGAATAGGCCGTTCTGGTGCAGCAGGTGTGGAAGGGATTGGACCTCTGGCCAGGCACAGCTGACTAACCCCTCTTCTGCAGGTATGTTCTGGGTGGAGGTGCCATCTGCATGGAACTTCTCACCAAGCAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................CTGACTAACCCCTCTTCTGCAG.................................................. | 22 | 1 | 15.00 | 15.00 | 9.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GCTGACTAACCCCTCTTCTGCAG.................................................. | 23 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................AACTTCTCACCAAGCAGGgc | 20 | gc | 3.00 | 0.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TTGGACCTCTGGCCAGGCACAGCTGAC................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGACTAACCCCTCTTCTGCAGt................................................. | 22 | t | 3.00 | 0.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................GGGATTGGACCTCTGGCCAGGCACAGC....................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................CTGACTAACCCCTCTTCTGCAGaa................................................ | 24 | aa | 2.00 | 15.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................CTGACTAACCCCTCTTCTGCAGa................................................. | 23 | a | 2.00 | 15.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................ATGGAACTTCTCACCAAGC... | 19 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........CACCGTTCGTCAGctga............................................................................................................................................................................ | 17 | ctga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....TGACCCACCGTTCGTCAGGGTTGTGT........................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGGCTGGGCAGAGGGAATAGt........................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................CAGAGGGAATAGGCCGTTCTGGTGCA.............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................CATCTGCATGGAACTTCT........... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................GAACTTCTCACCAAGCAG. | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGACCCACCGTTCGTCAGG............................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......GACCCACCGTTCGTCAGGGTTG........................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................GAAGGGATTGGACCTCTGGCCAGGCAC.......................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................GGAATAGGCCGTTCTGGTGCAGCAGGTGTGG.................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................TGCATGGAACTTCTCACCAAGCAGGgc | 27 | gc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................CATCTGCATGGAACTTCTCACCAAGCA.. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................CCAGTCCTCTCTGGAGG..................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCCTTTGACCCACCGTTCGTCAGGGTTGTGTCTCCAGTCCTCTCTGGAGGGTGAGTGGCTGGGCAGAGGGAATAGGCCGTTCTGGTGCAGCAGGTGTGGAAGGGATTGGACCTCTGGCCAGGCACAGCTGACTAACCCCTCTTCTGCAGGTATGTTCTGGGTGGAGGTGCCATCTGCATGGAACTTCTCACCAAGCAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................CAGCAGGTGTGGAAGGGtggt............................................................................................... | 21 | tggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |