| Gene: Mtx1 | ID: uc008pye.1_intron_4_0_chr3_89014599_r.5p | SPECIES: mm9 |
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(5) PIWI.ip |
(2) PIWI.mut |
(14) TESTES |
| GGAAAGTCATTACAGTGCCACACAAGATCATCACCCATCTTCGTAAAGAGGTAGGTGACTTGAGTGGGGGCTGACAATGGAGGAAATCCAGTCCGTGAAGTGTAACTTATTTATTGGCCACCAGACACAGGCCAGGCAAGAGCAGTGTGATCCAGAGCAGGGAGGAGCAGCATGGGGGATGCAGTGTGACTGTGACAAGCAGTTGGCCAGATAGTGAACTTAAGGGGCTGTGGGGTGGGATAAGCGGAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAGGTGACTTGAGTGGGGGCTGACAATGGAGGAAATCCAGTCCGTGAAGTG.................................................................................................................................................... | 52 | 1 | 98.00 | 98.00 | 98.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TTACAGTGCCACACAAGATCATCACCCA..................................................................................................................................................................................................................... | 28 | 1 | 6.00 | 6.00 | - | 3.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........TACAGTGCCACACAAGATCATCACCCATC................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........TTACAGTGCCACACAAGATCATCACCCATt................................................................................................................................................................................................................... | 30 | t | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| .........TTACAGTGCCACACAAGATCATCACCC...................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................ACACAGGCCAGGCAAcat............................................................................................................ | 18 | cat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................CACACAAGATCATCACCCATCTTCGTA............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......TCATTACAGTGCCACACAAGATCATCAC........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........TTACAGTGCCACACAAGATCATCACCCATC................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........TACAGTGCCACACAAGATCATCACCCAT.................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......CATTACAGTGCCACACAAGATCATCACCC...................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TTACAGTGCCACACAAGATCATCACCCctc................................................................................................................................................................................................................... | 30 | ctc | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......CATTACAGTGCCACACcaga............................................................................................................................................................................................................................... | 20 | caga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............TGCCACACAAGATCATCACCCATC................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................GACAAGCAGTTGGCCAGATAGTGAACT.............................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......CATTACAGTGCCACACAAGATCATCACC....................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TACAGTGCCACACAAGATCATCACCC...................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGACAAGCAGTTGGCCAGATAGTGAAC............................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TGTGACAAGCAGTTGGC........................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| GGAAAGTCATTACAGTGCCACACAAGATCATCACCCATCTTCGTAAAGAGGTAGGTGACTTGAGTGGGGGCTGACAATGGAGGAAATCCAGTCCGTGAAGTGTAACTTATTTATTGGCCACCAGACACAGGCCAGGCAAGAGCAGTGTGATCCAGAGCAGGGAGGAGCAGCATGGGGGATGCAGTGTGACTGTGACAAGCAGTTGGCCAGATAGTGAACTTAAGGGGCTGTGGGGTGGGATAAGCGGAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................CAGGCAAGAGCAGTGTGATCCAGAGCA........................................................................................... | 27 | 1 | 5.00 | 5.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................GGCCAGGCAAGAGCAGTGTGATCCAGA.............................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................GCCAGGCAAGAGCAGTGTGATCCAGAGCA........................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................AAGAGCAGTGTGATCCAGAGCAGGGA....................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................CATCTTCGTAAAGAGGTAGGTGACTTGA........................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................GTGGGGGCTGACAATGGAGGAAATCCAa................................................................................................................................................................ | 28 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GCAGTGTGATCCAGAGCAGGGAGGAGCA................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................GGCAAGAGCAGTGTGATCCAGAGCAcggc........................................................................................... | 29 | cggc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................CACACAAGATCATCACCCATCTTCGt............................................................................................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................AGGCCAGGCAAGAGCAGTGTGATCCAGA.............................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................TAACTTATTTATTGGCCACCAGACACA......................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |