| Gene: Clk2 | ID: uc008pxt.1_intron_0_0_chr3_88969029_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| CCATCACGGACTTCCTGTGGGACAAGCGCACGGGCCTCGCCGCCAGAACGGTGAGCGCGCGGGCTGGCGGACCTTGGGGCCGCGGAAAGATGGCTACCGCCAGACGGACGGCAACGGGATATGGAGAAATTAGGAGTGTCGGGCTCTCGAAGCAGCAGAGTAGCGAGATGAGAGGGAGGGAGGTCGACGTGTTTCGGTGTAGCAGCAAGACCTATAGTAAACTTGGAAAAGCCTTAGAAGTGATGAGGTA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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| ..................................................................................................................................TAGGAGTGTCGGGCTCTCGAAGCAGC.............................................................................................. | 26 | 1 | 6.00 | 6.00 | 1.00 | - | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - |
| .....ACGGACTTCCTGTGGGACA.................................................................................................................................................................................................................................. | 19 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATTAGGAGTGTCGGGCTCTCGAAGCAGCAGAGT......................................................................................... | 33 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................ATTAGGAGTGTCGGGCTCTCGAAGCAGCAG............................................................................................ | 30 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........ACTTCCTGTGGGACAAGCGC............................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................TGGGACAAGCGCACGGGCCTCGCCGCC.............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................CAGACGGACGGCAACGGGATAT................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........ACTTCCTGTGGGACAAGCGCA............................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CGGGATATGGAGAAATTAGGAGT................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................GAGTGTCGGGCTCTCGAAGC................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................CGCCAGAACGGTGAGCGCGCGGGCTG........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................ACGGACGGCAACGGGATATGGAG............................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...TCACGGACTTCCTGTGGGACAAGCGCA............................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................CGAAGCAGCAGAGTggtt..................................................................................... | 18 | ggtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................GGGATATGGAGAAATTAGGAGTGTC.............................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................ATGAGAGGGAGGGAGGTCGACa............................................................. | 22 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TAGTAAACTTGGAAAAGCCTTAGAAGTGA....... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................AGAACGGTGAGCGCGCGG............................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................AAATTAGGAGTGTCGGGCTCTCGAAGC................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................GACGGACGGCAACGGGATATGGAGAA.......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................GTCGGGCTCTCGAAGCAGCAG............................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................CGGACGGCAACGGGATATG............................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................CGGTGAGCGCGCGGta.......................................................................................................................................................................................... | 16 | ta | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................CGGTGAGCGCGCGGGC.......................................................................................................................................................................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| CCATCACGGACTTCCTGTGGGACAAGCGCACGGGCCTCGCCGCCAGAACGGTGAGCGCGCGGGCTGGCGGACCTTGGGGCCGCGGAAAGATGGCTACCGCCAGACGGACGGCAACGGGATATGGAGAAATTAGGAGTGTCGGGCTCTCGAAGCAGCAGAGTAGCGAGATGAGAGGGAGGGAGGTCGACGTGTTTCGGTGTAGCAGCAAGACCTATAGTAAACTTGGAAAAGCCTTAGAAGTGATGAGGTA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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