chr3:88704000 88704249 +
(1)
OTHER.ip 		(2)
OTHER.mut 		(6)
PIWI.ip 		(2)
PIWI.mut 		(1)
TDRD1.ip 		(29)
TESTES

Sense strand
AGGACTTTGCTGCTTTCCTGCTGCCTGAGCAAGCCCTGTCGTGTGGACTCGTAAGTCCACTTTGACGGGCAAAGACTTTACAGCTGACTCCGGGGCAGAGGCAGAGGGGCTCCAATGCAGCCAATCAAGACAGTTCCAGTTTTCCCGTTTGTTTACAGGGTTTTATCTGTAGTACAAGTGGAGATCTTGATACGTCACACTCTGCCCTCCCTTCTGAAAAGTACATTTAAAAATTTTTTTAAAATATATG
.......................................................(((((...((((((..((((((....(((((.((....(((....(((..((....))..))).))).....)).)))))..))))))))))))((((((((((......))))))).))).)))))....................................................................
.......................................................56.........................................................................................................................................195.....................................................
 Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes) 		SRR028731(GSM400968)
Mili-wt-associated. (testes) 		SRR014231(GSM319955)
16.5 dpc total. (testes) 		SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes) 		SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		GSM509280(GSM509280)
small RNA cloning by length. (testes) 		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes) 		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		GSM475280(GSM475280)
Mili-IP. (mili testes) 		SRR014235(GSM319959)
2 dpp total. (testes) 		GSM475281(GSM475281)
total RNA. (testes) 		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes) 		GSM475279(GSM475279)
Miwi-IP. (miwi testes) 		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes) 		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTGAT........................................................... 28 2 63.00 63.00 20.00 21.50 9.00 4.50 4.50 - 0.50 1.00 - - - - 0.50 - - - - - 0.50 - - 0.50 - - - - - - 0.50
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTGA............................................................ 27 2 50.50 50.50 19.00 14.50 8.50 6.50 1.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTG............................................................. 26 2 21.00 21.00 8.00 4.00 4.00 2.50 1.50 - - - - - - - 0.50 - - - - - - - - - - - - 0.50 - - -
..............................................................TGACGGGCAAAGACTTTACAGCTGACT................................................................................................................................................................. 27 2 8.50 8.50 2.00 1.00 - 0.50 - 5.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCTGACT................................................................................................................................................................. 29 2 7.00 7.00 2.50 1.00 1.50 1.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCTGAC.................................................................................................................................................................. 28 2 6.50 6.50 2.50 3.00 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCTG.................................................................................................................................................................... 26 2 6.50 6.50 2.50 1.50 0.50 0.50 0.50 - - 0.50 - - - 0.50 - - - - - - - - - - - - - - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCTGA................................................................................................................................................................... 27 2 5.00 5.00 2.00 1.50 1.00 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTGATA.......................................................... 29 2 5.00 5.00 - 0.50 1.00 0.50 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCTGACTC................................................................................................................................................................ 30 2 4.50 4.50 1.00 1.00 1.00 0.50 0.50 - - - - - - - - - - - - - - - - - 0.50 - - - - - -
..............................................................TGACGGGCAAAGACTTTACAGCTGACTC................................................................................................................................................................ 28 2 4.50 4.50 1.50 2.00 0.50 - - - - - - - - - - - - - - - - - - - - 0.50 - - - - -
................................................................................................................................................................TTTTATCTGTAGTACAAGTGGAGATCT............................................................... 27 2 4.00 4.00 1.00 1.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................TTTATCTGTAGTACAAGTGGAGATCTT.............................................................. 27 2 3.50 3.50 1.00 1.00 0.50 0.50 - - - - - - - - - - - - - - - - 0.50 - - - - - - - -
..............................................................TGACGGGCAAAGACTTTACAGCTGACTCC............................................................................................................................................................... 29 2 3.50 3.50 1.00 2.00 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GGGTTTTATCTGTAGTACAAGTGGAGA.................................................................. 27 2 3.00 3.00 - 0.50 0.50 0.50 0.50 - - 0.50 - - - - - - - 0.50 - - - - - - - - - - - - -
..................................................................................................................................................................TTATCTGTAGTACAAGTGGAGATCTTGAT........................................................... 29 2 3.00 3.00 1.00 - - 1.00 - - - - - - - - - 0.50 - - - - - - - - - - - - - 0.50 -
....................................................................................................................................................................ATCTGTAGTACAAGTGGAGATCTTGAT........................................................... 27 2 2.50 2.50 0.50 0.50 - 0.50 0.50 - - - - - - - - - 0.50 - - - - - - - - - - - - - -
....................................................................................................................................................................ATCTGTAGTACAAGTGGAGATCTTGATAt......................................................... 29 t 2.00 0.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................TTTTATCTGTAGTACAAGTGGAGATC................................................................ 26 2 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................CAGGGTTTTATCTGTAGTACAAGTGGAG................................................................... 28 2 2.00 2.00 1.00 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTGt............................................................ 27 t 2.00 21.00 0.50 0.50 0.50 - - - - - - - - - 0.50 - - - - - - - - - - - - - - - -
...........................................TGGACTCGTAAGTCCACTTTGACGGGC.................................................................................................................................................................................... 27 2 2.00 2.00 0.50 1.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................TGGACTCGTAAGTCCACTTTGACGGGCA................................................................................................................................................................................... 28 2 2.00 2.00 - 0.50 1.00 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................ATCTGTAGTACAAGTGGAGATCTTGA............................................................ 26 2 1.50 1.50 - 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................TTTATCTGTAGTACAAGTGGAGATCTTGAT........................................................... 30 2 1.50 1.50 - - 0.50 0.50 - - - - - - - - - 0.50 - - - - - - - - - - - - - - -
..........................................................ACTTTGACGGGCAAAGACTTTACAGCT..................................................................................................................................................................... 27 2 1.50 1.50 1.00 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................TTATCTGTAGTACAAGTGGAGATCTT.............................................................. 26 2 1.50 1.50 1.00 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTGATAC......................................................... 30 2 1.50 1.50 0.50 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................TTTTATCTGTAGTACAAGTGGAGATCTT.............................................................. 28 2 1.50 1.50 1.00 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................TCCACTTTGACGGGCAAAGACTTTACA........................................................................................................................................................................ 27 2 1.00 1.00 - - 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................ACGGGCAAAGACTTTACAGCTGACTCCGG............................................................................................................................................................. 29 2 1.00 1.00 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................CTTTGACGGGCAAAGACTTTACAGCTG.................................................................................................................................................................... 27 2 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................TCTGTAGTACAAGTGGAGATCTTGAT........................................................... 26 2 1.00 1.00 - 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................TTTATCTGTAGTACAAGTGGAGATCTTGA............................................................ 29 2 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................TTTATCTGTAGTACAAGTGGAGATCT............................................................... 26 2 1.00 1.00 - 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................TGCTGCCTGAGCAAGCCCTGTCGTGTGt............................................................................................................................................................................................................ 28 t 1.00 0.50 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................TACAGCTGACTCCGGGGCAGAGGCAGt................................................................................................................................................. 27 t 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.........................TGAGCAAGCCCTGTCGTGTGGACTCG....................................................................................................................................................................................................... 26 2 1.00 1.00 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................ATCTGTAGTACAAGTGGAGATCTTGATt.......................................................... 28 t 1.00 2.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................TGCTGCCTGAGCAAGCCCTGTCGTGT.............................................................................................................................................................................................................. 26 2 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................TGTGGACTCGTAAGTCCACTTTGACGGt..................................................................................................................................................................................... 28 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGA.................................................................. 21 2 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................................................................................................................TTATCTGTAGTACAAGTGGAGATCTTGA............................................................ 28 2 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TGGAGATCTTGATACGTCACACTCTGC............................................. 27 2 1.00 1.00 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................ACTTTGACGGGCAAAGACTTTACAGCTG.................................................................................................................................................................... 28 2 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................TCTGTAGTACAAGTGGAGATCTTGATAC......................................................... 28 2 1.00 1.00 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................CCTGAGCAAGCCCTGTCGTGTGGACTC........................................................................................................................................................................................................ 27 2 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...........................................................................................................................................................CAGGGTTTTATCTGTAGTACAAGTGGA.................................................................... 27 2 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................TTACAGCTGACTCCGGGGCAGAGGCA................................................................................................................................................... 26 2 0.50 0.50 - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................TACAAGTGGAGATCTTGATACGTCACAC.................................................. 28 2 0.50 0.50 - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - -
...............................AGCCCTGTCGTGTGGAC.......................................................................................................................................................................................................... 17 2 0.50 0.50 - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - -
.................................................................CGGGCAAAGACTTTACAGCTGACTCCGG............................................................................................................................................................. 28 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGAT................................................................. 22 2 0.50 0.50 - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - -
...................................................TAAGTCCACTTTGACGGGCAAAGACTT............................................................................................................................................................................ 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................TATCTGTAGTACAAGTGGAGATCTTGATt.......................................................... 29 t 0.50 63.00 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................GGCAAAGACTTTACAGCTGACTCCGGG............................................................................................................................................................ 27 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................TGTAGTACAAGTGGAGATCTTGATAC......................................................... 26 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............TCCTGCTGCCTGAGCAAGCCCTGTCGT................................................................................................................................................................................................................ 27 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................TCTGTAGTACAAGTGGAGATCTTGATA.......................................................... 27 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................AGGGTTTTATCTGTAGTACAAGTGGAGATC................................................................ 30 2 0.50 0.50 - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - -
...........................................................CTTTGACGGGCAAAGACTTTACAGCT..................................................................................................................................................................... 26 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................AAGACTTTACAGCTGACTCCGGGGCA......................................................................................................................................................... 26 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................GTCCACTTTGACGGGCAAAGACTTTAC......................................................................................................................................................................... 27 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................AGGGTTTTATCTGTAGTACAAGTGGAG................................................................... 27 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................GGTTTTATCTGTAGTACAAGTGGAGATCT............................................................... 29 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTAAGTCCACTTTGACGGGCAAAGACT............................................................................................................................................................................. 27 2 0.50 0.50 - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - -
.....................................................AGTCCACTTTGACGGGCAAAGACTTT........................................................................................................................................................................... 26 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................TTTATCTGTAGTACAAGTGGAGATCTTG............................................................. 28 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................GGGCAAAGACTTTACAGCTGACTCCGG............................................................................................................................................................. 27 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................AGCAAGCCCTGTCGTGTGGACTCGTA..................................................................................................................................................................................................... 26 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................CGTAAGTCCACTTTGACGGGCAAAGACT............................................................................................................................................................................. 28 2 0.50 0.50 - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................TTATCTGTAGTACAAGTGGAGATCTTG............................................................. 27 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................AAGACTTTACAGCTGACTCCGGGGCAt........................................................................................................................................................ 27 t 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................AGCAAGCCCTGTCGTGTGGACTCGTAAG................................................................................................................................................................................................... 28 2 0.50 0.50 - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - -
...........................................................................................................................................................CAGGGTTTTATCTGTAGTACAAGTGG..................................................................... 26 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TGGAGATCTTGATACGTCACACTCTG.............................................. 26 2 0.50 0.50 - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - -
..................TGCTGCCTGAGCAAGCCCTGTCGTGTG............................................................................................................................................................................................................. 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................TCCCTTCTGAAAAGTACATTTAAAAAT................ 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................GTTTTATCTGTAGTACAAGTGGAGATC................................................................ 27 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................TTGACGGGCAAAGACTTTACAGCTGACT................................................................................................................................................................. 28 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................GGACTCGTAAGTCCACTTTGACGGGCA................................................................................................................................................................................... 27 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - -
..................................................................................................................................................................TTATCTGTAGTACAAGTGGAGATCTTGATt.......................................................... 30 t 0.50 3.00 - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCT..................................................................................................................................................................... 25 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................TTTACAGCTGACTCCGGGGCAGAGGCA................................................................................................................................................... 27 2 0.50 0.50 - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................CAGGGTTTTATCTGTAGTACAAGTGGAGATC................................................................ 31 2 0.50 0.50 - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................TACAGGGTTTTATCTGTAGTACAAGTGGAGA.................................................................. 31 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - -
............................................................TTTGACGGGCAAAGACTTTACAGCTGACTCC............................................................................................................................................................... 31 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - -
.........................TGAGCAAGCCCTGTCGTGTGGACTCGT...................................................................................................................................................................................................... 27 2 0.50 0.50 - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - -
.................................................................................................................................................................TTTATCTGTAGTACAAGTGGAGATC................................................................ 25 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................TAGTACAAGTGGAGATCTTGATACGTCAC.................................................... 29 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................ACGTCACACTCTGCCCTCCCT...................................... 21 2 0.50 0.50 - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - -
.......................................................TCCACTTTGACGGGCAAAGACTTTAC......................................................................................................................................................................... 26 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................TGGACTCGTAAGTCCACTTTGACGGGCAA.................................................................................................................................................................................. 29 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................AGGGTTTTATCTGTAGTACAAGTGGAGATCTT.............................................................. 32 2 0.50 0.50 - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................GGGTTTTATCTGTAGTACAAGTGGAGATCT............................................................... 30 2 0.50 0.50 - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - -
.........................................................CACTTTGACGGGCAAAGACT............................................................................................................................................................................. 20 2 0.50 0.50 - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - -
.................................................CGTAAGTCCACTTTGACGGGCAAAGACTTT........................................................................................................................................................................... 30 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................TTATCTGTAGTACAAGTGGAGATCTTGATA.......................................................... 30 2 0.50 0.50 - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - -

Antisense strand
AGGACTTTGCTGCTTTCCTGCTGCCTGAGCAAGCCCTGTCGTGTGGACTCGTAAGTCCACTTTGACGGGCAAAGACTTTACAGCTGACTCCGGGGCAGAGGCAGAGGGGCTCCAATGCAGCCAATCAAGACAGTTCCAGTTTTCCCGTTTGTTTACAGGGTTTTATCTGTAGTACAAGTGGAGATCTTGATACGTCACACTCTGCCCTCCCTTCTGAAAAGTACATTTAAAAATTTTTTTAAAATATATG
.......................................................(((((...((((((..((((((....(((((.((....(((....(((..((....))..))).))).....)).)))))..))))))))))))((((((((((......))))))).))).)))))....................................................................
.......................................................56.........................................................................................................................................195.....................................................
 Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes) 		SRR028731(GSM400968)
Mili-wt-associated. (testes) 		SRR014231(GSM319955)
16.5 dpc total. (testes) 		SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes) 		SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		GSM509280(GSM509280)
small RNA cloning by length. (testes) 		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes) 		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		GSM475280(GSM475280)
Mili-IP. (mili testes) 		SRR014235(GSM319959)
2 dpp total. (testes) 		GSM475281(GSM475281)
total RNA. (testes) 		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes) 		GSM475279(GSM475279)
Miwi-IP. (miwi testes) 		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes) 		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
.................................................................................................................................ACAGTTCCAGTTTTCCCGTTTGTTTACA............................................................................................. 28 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - -