| Gene: Ubqln4 | ID: uc008pvq.1_intron_0_0_chr3_88357835_f.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| CCAAGGACAAGGAGGAGATCGTGATCTGCGATCAAGCCTCGGTCAAGGAGGTAGTATCTGGCTGGGAGGAGACAGGAGGGCGGGAGCAGCGCACCGAGGGGGTCAGAGCAGAGAGGGAGACCTCGGGGTCGGCCTGGCGCCGGGGACGGGCCCCCGGCCGGGGCGGAATCCAGGGGCATACAGGCGGGAGAAGCGGGTAGGGGGCGCCCTGCCAGGGCTAGTCCGGGGAGCGTGGCGCGGGTAGGGGCCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................TCTGGCTGGGAGGAGACAGGAGGG.......................................................................................................................................................................... | 24 | 1 | 7.00 | 7.00 | 2.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAGG........................................................................................................................................................................... | 23 | 1 | 5.00 | 5.00 | - | 3.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................AGCGGGTAGGGGGCcaaa......................................... | 18 | caaa | 5.00 | 0.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAG............................................................................................................................................................................ | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................GCAGAGAGGGAGACCTCGGGGTCGGCCTG.................................................................................................................. | 29 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TAGTATCTGGCTGGGAGGAGACAG............................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................TCGGTCAAGGAGGTAGTATCTGGCT........................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| .................................................................................................................................................................................................................TGCCAGGGCTAGTCCGGGGAGCGTGGC.............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................TAGTATCTGGCTGGGAGGAGACAGG.............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGA............................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTAGTATCTGGCTGGGAGGAGAC................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................AGCGGGTAGGGGGCcagc......................................... | 18 | cagc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGCCAGGGCTAGTCCGGGGAGCG.................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................AGCGGGTAGGGGGCcaca......................................... | 18 | caca | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TACAGGCGGGAGAAGCGGGTAGGG................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAGGGCGata..................................................................................................................................................................... | 29 | ata | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAGGGC......................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAGta.......................................................................................................................................................................... | 24 | ta | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................................AAGGAGGTAGTATCTGGCTGG......................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAa............................................................................................................................................................................ | 22 | a | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TACAGGCGGGAGAAGCGGGTAGGGGG.............................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................TGGCTGGGAGGAGACAGGAGGGCGG....................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...AGGACAAGGAGGAGcgga..................................................................................................................................................................................................................................... | 18 | cgga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAGGGt......................................................................................................................................................................... | 25 | t | 1.00 | 7.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGACAGGAGt........................................................................................................................................................................... | 23 | t | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TCAGAGCAGAGAGGGAGA.................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ........................................................TCTGGCTGGGAGGAGA.................................................................................................................................................................................. | 16 | 8 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - |
| .CAAGGACAAGGAGGAGA........................................................................................................................................................................................................................................ | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - |
| CCAAGGACAAGGAGGAGATCGTGATCTGCGATCAAGCCTCGGTCAAGGAGGTAGTATCTGGCTGGGAGGAGACAGGAGGGCGGGAGCAGCGCACCGAGGGGGTCAGAGCAGAGAGGGAGACCTCGGGGTCGGCCTGGCGCCGGGGACGGGCCCCCGGCCGGGGCGGAATCCAGGGGCATACAGGCGGGAGAAGCGGGTAGGGGGCGCCCTGCCAGGGCTAGTCCGGGGAGCGTGGCGCGGGTAGGGGCCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................GGGCTAGTCCGGGcca....................... | 16 | cca | 5.00 | 0.00 | - | 2.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GGGGACGGGCCCCCG.............................................................................................. | 15 | 2 | 3.00 | 3.00 | 0.50 | - | - | - | 2.50 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................GGGCTAGTCCGGcca........................ | 15 | cca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GGGACGGGCCCCCGtggg.............................................................................................. | 18 | tggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |