| Gene: Isg20l2 | ID: uc008ptj.1_intron_0_0_chr3_87734534_f.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(25) TESTES |
| AACAAGGTTATAACTACTAAGGCGTTTCTCCAGCCCCAGCATCTTTAGTTTTTAAAATGGCACAGAGATCCGGAGAAGGGAAATAACCCTTTTAAGACCAACCTAAAGGTGAATTGTGGAGGCTTCAGTAGTTAGCCGGGCTTTGGGGCTTGTGGAAGTTATCACTTATGTCTTCCAGAACTGATCTTCTTTTCTCTCAGGCCTATGGTGCGGGAATCAGGATTACTTTGTCCCCAAGGCTGATTGCAGA ..........................................................(((((.(((.(((..(((((((......))))))).......(((....))).......)))..)))..)).)))..................................................................................................................... ..................................................51................................................................................133................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ......................................................................................................................................................................................................AGGCCTATGGTGCGGGAATCAGGATTACTTTGTCCCCAAGGCTGATTGCAGA | 52 | 1 | 155.00 | 155.00 | 155.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TCAGGATTACTTTGTCCCCAAGGCTG........ | 26 | 1 | 13.00 | 13.00 | - | - | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGGTGCGGGAATCAGGATTACTTTG.................... | 25 | 1 | 8.00 | 8.00 | - | 2.00 | - | - | - | 3.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................TAAAATGGCACAGAGATCCGGAGAAG............................................................................................................................................................................ | 26 | 1 | 8.00 | 8.00 | - | - | 1.00 | - | 1.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TAAAATGGCACAGAGATCCGGAGAAGG........................................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | - | - | - | - | 1.00 | - | 1.00 | - | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATGGTGCGGGAATCAGGATTACTTTG.................... | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGGTGCGGGAATCAGGATTACTTTGTC.................. | 27 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - |
| .............................................................................................................................................................................................................TGGTGCGGGAATCAGGATTACTTTGTCCCC............... | 30 | 1 | 4.00 | 4.00 | - | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................GGCCTATGGTGCGGGAATCAGGATT.......................... | 25 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGGTGCGGGAATCAGGATTACTTTGT................... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TAAAATGGCACAGAGATCCGGAGAAGGt.......................................................................................................................................................................... | 28 | t | 2.00 | 6.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TAAAGGTGAATTGTGGAGGCTTCAGTAG....................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TAAAGGTGAATTGTGGAGGCTTCAGT......................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGGTGCGGGAATCAGGATTACTTTGTCCC................ | 29 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GAATCAGGATTACTTTGTCCCCAAGGCT......... | 28 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................CAGGATTACTTTGTCCCCAAGGCTGA....... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TCAGGATTACTTTGTCCCCAAGGCTGA....... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TAGTTTTTAAAATGGCACAGAGATCC................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................TGGCACAGAGATCCGGAGAAGGGAAATt..................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TTTTCTCTCAGGCCTATGGTGCGG..................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GGAATCAGGATTACTTTGa................... | 19 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................CTCCAGCCCCAGCATCTTTAGTTTTT..................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................GACCAACCTAAAGGTGAATTGTGGAGGC............................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTTTTCTCTCAGGCCTATGGTGCG...................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TGGCACAGAGATCCGGAGAAGGG.......................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ATGGTGCGGGAATCAGGATTACTTTG.................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TTGGGGCTTGTGGAAGTTATCACTTA.................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................GAACTGATCTTCTTTTCTCTCAGGCCT.............................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................TGAATTGTGGAGGCTTCAGTAGTTAGCCGGGC............................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATGGTGCGGGAATCAGGATTACTTTGTCC................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................AGCCGGGCTTTGGGGCTTGTGGAAG............................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TAAAGGTGAATTGTGGAGGCTTCAGTA........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................TAGCCGGGCTTTGGGGCTTGTGGAA............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................TGGTGCGGGAATCAGGATTACTTc..................... | 24 | c | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TTAAAATGGCACAGAGATCCGGAGA.............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TGGGGCTTGTGGAAGTTATCACTTATGTC.............................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATGGTGCGGGAATCAGGATTACTTT..................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................GTGAATTGTGGAGGCTTCAGTAGTT..................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TTTAAAATGGCACAGAGATCCGGAGA.............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GGATTACTTTGTCCCCAAGGCTGATTGC... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ATGGTGCGGGAATCAGGATTACTTTGT................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................TAAAGGTGAATTGTGGAGGCTTCAG.......................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................TTTGTCCCCAAGGCTGATTGCAGAcca | 27 | cca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CAGAACTGATCTTCTTTTCTCTCAG.................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TGGGGCTTGTGGAAGTT.......................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AACAAGGTTATAACTACTAAGGCGTTTCTCCAGCCCCAGCATCTTTAGTTTTTAAAATGGCACAGAGATCCGGAGAAGGGAAATAACCCTTTTAAGACCAACCTAAAGGTGAATTGTGGAGGCTTCAGTAGTTAGCCGGGCTTTGGGGCTTGTGGAAGTTATCACTTATGTCTTCCAGAACTGATCTTCTTTTCTCTCAGGCCTATGGTGCGGGAATCAGGATTACTTTGTCCCCAAGGCTGATTGCAGA ..........................................................(((((.(((.(((..(((((((......))))))).......(((....))).......)))..)))..)).)))..................................................................................................................... ..................................................51................................................................................133................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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