| Gene: BC023814 | ID: uc008pth.1_intron_6_0_chr3_87731971_r.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| TCACCCGCGTCCTAGCTCACTACCGTTCCATCCTGGACGCCTACATCATCGTGAGGCCACCGGGCTGAGGGCGGGGTGCTTCTTGGGGGGCGGGGGGTGAATAGGAGCCCACTGCAGAGAAAATGTGGAGACAGCTTTTATCTCTTCCTAATAAGGAACGCGTTGACTACTAGAATACTTTTCACCCAGCCTTCTGACTCTAATACTTAAGTTTTGTTTGTTTCATTTGAAACCCCACAACCAACATTTG ..................................................(((.((((....))))...(((((.(((.(((((((((.((((.((((........)))).)))).(((((((..((....))...))).))))..)))..)))))).))).))).)).......)))........................................................................ ..................................................51................................................................................................................................181................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................TAAGGAACGCGTTGACTACTAGAATA......................................................................... | 26 | 1 | 16.00 | 16.00 | 10.00 | 1.00 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TAAGGAACGCGTTGACTACTAGAAT.......................................................................... | 25 | 1 | 9.00 | 9.00 | 4.00 | 2.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TCATCGTGAGGCCACCGGGCTGAGGGC.................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TAAGGAACGCGTTGACTACTAGAATACTT...................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GGAACGCGTTGACTACTAGA............................................................................ | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ...........................................CATCATCGTGAGGCCACCGGGCTGAGG.................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TCGTGAGGCCACCGGGCTGAGGGCGG................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................TACATCATCGTGAGGCCACCGG........................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TAATAAGGAACGCGTTGACTACTAGA............................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................TAAGGAACGCGTTGACTACTAGAATAC........................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................GCCACCGGGCTGAGGGCGGGGT............................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................................................................................................TAATAAGGAACGCGTTGACTACTAGAAT.......................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................TGACTACTAGAATACTTTTCACCCAGC............................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................AGGAACGCGTTGACTACTAGAATACTTTT.................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................TTCTGACTCTAATACTTAAGTTTTGT................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................AAGGAACGCGTTGACTACTAGAATA......................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................CATCATCGTGAGGCCACCGGGCTGAGGGCa................................................................................................................................................................................. | 30 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................TAATAAGGAACGCGTTGACTACTAGAATA......................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............TAGCTCACTACCGTTCCATCCTGGACGCC................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TAAGGAACGCGTTGACTACTAGAA........................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TCGTGAGGCCACCGGGCTGAGGGCG................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TAGCTCACTACCGTTCCATCCTGGACGC.................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TCACCCGCGTCCTAGCTCACTACCGTTCCATCCTGGACGCCTACATCATCGTGAGGCCACCGGGCTGAGGGCGGGGTGCTTCTTGGGGGGCGGGGGGTGAATAGGAGCCCACTGCAGAGAAAATGTGGAGACAGCTTTTATCTCTTCCTAATAAGGAACGCGTTGACTACTAGAATACTTTTCACCCAGCCTTCTGACTCTAATACTTAAGTTTTGTTTGTTTCATTTGAAACCCCACAACCAACATTTG ..................................................(((.((((....))))...(((((.(((.(((((((((.((((.((((........)))).)))).(((((((..((....))...))).))))..)))..)))))).))).))).)).......)))........................................................................ ..................................................51................................................................................................................................181................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................ACCGTTCCATCCTGGACGCCTACATCA.......................................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | - | 1.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TACCGTTCCATCCTGGACGCCTACATCA.......................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........TCCTAGCTCACTACCGTT............................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CCGTTCCATCCTGGACGCCTACA............................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TCATCGTGAGGCCACCGGGCTGAG..................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CCGTTCCATCCTGGACGCCTACAT............................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................ACCGTTCCATCCTGGACGCCTACATCAt.......................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....GCGTCCTAGCTCACTACCGTTCCATCCt......................................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......CGTCCTAGCTCACTACCGTTCCATCC......................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................TCCATCCTGGACGCCTACATCATCGTGA.................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......CGTCCTAGCTCACTACCGTTCC............................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................CGTTCCATCCTGGACGCCTACATCAata.......................................................................................................................................................................................................... | 28 | ata | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CCGTTCCATCCTGGACGCCTACATCA.......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................CAGCCTTCTGACTCTA................................................ | 16 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |