uc008ppf.1_intron_1_0_chr3_82832573

AGAGTCAATGCAAGGACTCAGACTGGCCCTTCTGCTCTGATGATGACTGGGTAAGGCGAGCACACGGTGAACAAGGAACCTTCCTTATGCTGTTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTACATATATATATTCAATGGGTCCTAGAGACACCTCCCCACCAGAGATCATCTAACAGTAACATAGCTAGAAAAAATGGAAAGGAAACCAATCGAAGGACATTGTCTAGTTACATCGGGTCTCTGGTGGGATAAACATATGGGATGCCTGAGTAGTGGGACTACACAATTCCCAGAGCATCATGCAAGACTAAGCAGACCTTCATTTGAGAATTCACCTATGGCCTGTTAACTACTTTTGAGTCTGGATTTACTTGGAAGAGCTGGGGAGGAGAAGCAGCAAAGACTGGGATAACATTTCCAACTTCCGGTAGCTGAGAGACAGACCTTTTTCATCCAATCTTGCCCTCTGTTTTCAGAACCACAAATGCCCTTCAGGCTGCAGGATGAAAGGGTTGATTGACGAAGC	Size	Perfect hit	Total Norm	Perfect Norm	mjTestesWT1() Testes Data. (testes)	mjTestesWT3() Testes Data. (testes)	mjTestesWT2() Testes Data. (testes)	mjTestesKO7() Testes Data. (Zcchc11 testes)	mjTestesKO8() Testes Data. (Zcchc11 testes)	mjTestesWT4() Testes Data. (testes)	mjTestesKO6() Testes Data. (Zcchc11 testes)	GSM475281(GSM475281) total RNA. (testes)	mjTestesKO5() Testes Data. (Zcchc11 testes)	SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes)
............AGGACTCAGACTGGCCCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	14.00	14.00	14.00	-	-	-	-	-	-	-	-	-
...........AAGGACTCAGACTGGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	13.00	13.00	13.00	-	-	-	-	-	-	-	-	-
............AGGACTCAGACTGGCCCTTCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	8.00	8.00	8.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGAAAGGGT.............	23	1	8.00	8.00	8.00	-	-	-	-	-	-	-	-	-
..............GACTCAGACTGGCCCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	7.00	7.00	7.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................................................................................................................................................................................................................CTGGATTTACTTGGAAGAGCTGGGGAGG.........................................................................................................................................	28	1	7.00	7.00	7.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTGCAGGATGAAAG................	19	1	7.00	7.00	7.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTGCAGGATGAAAGGGTT............	23	1	6.00	6.00	6.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGCAGGATGAAAGGGTTGA..........	24	1	6.00	6.00	6.00	-	-	-	-	-	-	-	-	-
...................AGACTGGCCCTTCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	6.00	6.00	6.00	-	-	-	-	-	-	-	-	-
....................GACTGGCCCTTCTGCTCTGATGATGACTGGaacc.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	34	aacc	5.00	0.00	5.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTGCAGGATGAAAGGGTTGATTGACGA...	32	1	5.00	5.00	5.00	-	-	-	-	-	-	-	-	-
..........CAAGGACTCAGACTGGCCCTTCTGCTCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	5.00	5.00	5.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGAA..................	18	1	5.00	5.00	-	-	-	-	-	5.00	-	-	-	-
........TGCAAGGACTCAGACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	4.00	4.00	-	4.00	-	-	-	-	-	-	-	-
.....................................TGATGATGACTGGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	4.00	4.00	4.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGCAGGATGAAAGGGTT............	22	1	4.00	4.00	4.00	-	-	-	-	-	-	-	-	-
...................AGACTGGCCCTTCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	4.00	4.00	4.00	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................................................................................................................................................................................................TTTGAGTCTGGATTTACTTGGA......................................................................................................................................................	22	1	4.00	4.00	4.00	-	-	-	-	-	-	-	-	-
.........................GCCCTTCTGCTCTGATGATGACTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	4.00	4.00	-	4.00	-	-	-	-	-	-	-	-
...................AGACTGGCCCTTCTGCTCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	4.00	4.00	4.00	-	-	-	-	-	-	-	-	-
...........................................TGACTGGGTAAGGCGAGCACACGGTGAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	30	1	4.00	4.00	4.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................................................................................................................................................................................................................TTTACTTGGAAGAGCTGGGGAGGA........................................................................................................................................	24	1	4.00	4.00	-	4.00	-	-	-	-	-	-	-	-
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGCAGGATGAAAGGGTTGAT.........	25	1	3.00	3.00	3.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGGCTGCAGGATGAAAGGGTTG...........	26	1	3.00	3.00	3.00	-	-	-	-	-	-	-	-	-
...........AAGGACTCAGACTGGCCCTTCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3.00	3.00	-	-	-	-	-	-	-	-	-
......................CTGGCCCTTCTGCTCTGATGATGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-
.......................TGGCCCTTCTGCTCTGATGATGACTGGaac..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	30	aac	2.00	1.00	-	-	-	2.00	-	-	-	-	-	-
.............GGACTCAGACTGGCCCTTCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-
..........CAAGGACTCAGACTGGCCCTTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGAAAGGG..............	22	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-
.....................ACTGGCCCTTCTGCTCTGATGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2.00	2.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGGCTGCAGGATGAAAGG...............	22	1	2.00	2.00	-	2.00	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................................................................................................................................................................TCTGGATTTACTTGGAAGAGCTG...............................................................................................................................................	23	1	2.00	2.00	2.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................................................................................................................................................................................TTACTTGGAAGAGCTGGGGAGGAGAAGC...................................................................................................................................	28	1	2.00	2.00	2.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATG....................	16	5	1.40	1.40	1.40	-	-	-	-	-	-	-	-	-
.............................TTCTGCTCTGATGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	16	5	1.20	1.20	0.80	-	0.40	-	-	-	-	-	-	-
......................CTGGCCCTTCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTGCAGGATGAAAGGGTTGATTGAt.....	30	t	1.00	0.00	-	-	1.00	-	-	-	-	-	-	-
........TGCAAGGACTCAGACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-
............AGGACTCAGACTGGCCCTTCTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGAAAGGGTTGATTGACGAAG.	26	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................TGGATTTACTTGGAAGAGCTGGG.............................................................................................................................................	23	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-
............AGGACTCAGACTGGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGAAAGGGTTGATTG.......	29	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-
..............................TCTGCTCTGATGATGACTGGa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	a	1.00	0.00	-	-	1.00	-	-	-	-	-	-	-
...................AGACTGGCCCTTCTGCTCTGATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGAAAGGGg.............	23	g	1.00	2.00	1.00	-	-	-	-	-	-	-	-	-
..............................TCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-
......AATGCAAGGACTCAGACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGCAGGATGAAAGGGTTGATTGACGAAG.	33	1	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-
...GTCAATGCAAGGACTCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAGGGTTGATTGACG....	18	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-
.......................TGGCCCTTCTGCTCTGATGATGACTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCAGGCTGCAGGATGAAAGGG..............	24	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCAGGCTGCAGGATGAAAGGGT.............	25	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-
.........GCAAGGACTCAGACTGGCCCTTCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCTTCAGGCTGCAGGA......................	19	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-
..........CAAGGACTCAGACTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1.00	-	-	-	-	-	-	-	-	1.00	-
..............................TCTGCTCTGATGATGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-
...........AAGGACTCAGACTGGCCCTTCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	36	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-
.................................................................................................................................................................................................................................................................................................................................................................ACTACTTTTGAGTCT...................................................................................................................................................................	15	9	0.33	0.33	-	-	-	-	-	-	-	-	-	0.33
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGAT.....................	15	9	0.33	0.33	-	-	-	-	-	-	0.33	-	-	-
...........AAGGACTCAGACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	16	3	0.33	0.33	-	-	0.33	-	-	-	-	-	-	-
..........CAAGGACTCAGACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	3	0.33	0.33	-	0.33	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGA...................	17	4	0.25	0.25	-	0.25	-	-	-	-	-	-	-	-

AGAGTCAATGCAAGGACTCAGACTGGCCCTTCTGCTCTGATGATGACTGGGTAAGGCGAGCACACGGTGAACAAGGAACCTTCCTTATGCTGTTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTACATATATATATTCAATGGGTCCTAGAGACACCTCCCCACCAGAGATCATCTAACAGTAACATAGCTAGAAAAAATGGAAAGGAAACCAATCGAAGGACATTGTCTAGTTACATCGGGTCTCTGGTGGGATAAACATATGGGATGCCTGAGTAGTGGGACTACACAATTCCCAGAGCATCATGCAAGACTAAGCAGACCTTCATTTGAGAATTCACCTATGGCCTGTTAACTACTTTTGAGTCTGGATTTACTTGGAAGAGCTGGGGAGGAGAAGCAGCAAAGACTGGGATAACATTTCCAACTTCCGGTAGCTGAGAGACAGACCTTTTTCATCCAATCTTGCCCTCTGTTTTCAGAACCACAAATGCCCTTCAGGCTGCAGGATGAAAGGGTTGATTGACGAAGC

Size

Perfect hit

Total Norm

Perfect Norm

mjTestesWT1()
Testes Data. (testes)

mjTestesWT3()
Testes Data. (testes)

mjTestesWT2()
Testes Data. (testes)

mjTestesKO7()
Testes Data. (Zcchc11 testes)

mjTestesKO8()
Testes Data. (Zcchc11 testes)

mjTestesWT4()
Testes Data. (testes)

mjTestesKO6()
Testes Data. (Zcchc11 testes)

GSM475281(GSM475281)
total RNA. (testes)

mjTestesKO5()
Testes Data. (Zcchc11 testes)

SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)

............AGGACTCAGACTGGCCCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

14.00

...........AAGGACTCAGACTGGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

13.00

............AGGACTCAGACTGGCCCTTCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

8.00

...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGCAGGATGAAAGGGT.............

8.00

..............GACTCAGACTGGCCCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

7.00

..............................................................................................................................................................................................................................................................................................................................................................................CTGGATTTACTTGGAAGAGCTGGGGAGG.........................................................................................................................................

7.00

6.00

...................AGACTGGCCCTTCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

6.00

....................GACTGGCCCTTCTGCTCTGATGATGACTGGaacc.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

aacc

5.00

0.00

5.00

..........CAAGGACTCAGACTGGCCCTTCTGCTCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

5.00

........TGCAAGGACTCAGACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

.....................................TGATGATGACTGGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

...................AGACTGGCCCTTCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

.......................................................................................................................................................................................................................................................................................................................................................................TTTGAGTCTGGATTTACTTGGA......................................................................................................................................................

4.00

.........................GCCCTTCTGCTCTGATGATGACTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

...................AGACTGGCCCTTCTGCTCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

...........................................TGACTGGGTAAGGCGAGCACACGGTGAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

...................................................................................................................................................................................................................................................................................................................................................................................TTTACTTGGAAGAGCTGGGGAGGA........................................................................................................................................

4.00

3.00

...........AAGGACTCAGACTGGCCCTTCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

3.00

......................CTGGCCCTTCTGCTCTGATGATGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

.......................TGGCCCTTCTGCTCTGATGATGACTGGaac..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

aac

2.00

1.00

2.00

.............GGACTCAGACTGGCCCTTCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

..........CAAGGACTCAGACTGGCCCTTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

.....................ACTGGCCCTTCTGCTCTGATGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

.............................................................................................................................................................................................................................................................................................................................................................................TCTGGATTTACTTGGAAGAGCTG...............................................................................................................................................

2.00

....................................................................................................................................................................................................................................................................................................................................................................................TTACTTGGAAGAGCTGGGGAGGAGAAGC...................................................................................................................................

2.00

1.40

.............................TTCTGCTCTGATGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.20

0.80

0.40

......................CTGGCCCTTCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

........TGCAAGGACTCAGACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

............AGGACTCAGACTGGCCCTTCTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...............................................................................................................................................................................................................................................................................................................................................................................TGGATTTACTTGGAAGAGCTGGG.............................................................................................................................................

1.00

............AGGACTCAGACTGGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

..............................TCTGCTCTGATGATGACTGGa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...................AGACTGGCCCTTCTGCTCTGATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

2.00

1.00

..............................TCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

......AATGCAAGGACTCAGACTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...GTCAATGCAAGGACTCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.......................TGGCCCTTCTGCTCTGATGATGACTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.........GCAAGGACTCAGACTGGCCCTTCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

..........CAAGGACTCAGACTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

..............................TCTGCTCTGATGATGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...........AAGGACTCAGACTGGCCCTTCTGCTCTGATGATGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.................................................................................................................................................................................................................................................................................................................................................................ACTACTTTTGAGTCT...................................................................................................................................................................

0.33

...........AAGGACTCAGACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

..........CAAGGACTCAGACTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

0.25