| Gene: Gucy1a3 | ID: uc008pot.1_intron_3_0_chr3_81910170_r.3p | SPECIES: mm9 |
|
|
|
(8) OTHER.mut |
(1) OVARY |
(2) PIWI.mut |
(20) TESTES |
| AATTTCAGAACTGAGACCAAACTGAAGTGATTAAAAAGTCTATTCTTCTTTAGCTAGTTGGAAACAAAATGGATGATCTCAGAACCCACTTCTAATGCCAGACTCAAAAAGATTACCCCAGTAGCCATTTCCTCTCTGGTTTCGGAAAGGATTGGGAAACTTGACTAATGCATGGTAACAGGTTCTCCTTTCCTTTGCAGGTTATGGATCTCAAAGGTCAAATGATCTACATCGTTGAATCCAGTGCCAT .....................................................................................................................((...(((((.........)))))..))((((((..((..((((((((((.....))))..))))))..))..))))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................TCGGAAAGGATTGGGAAACTTGA...................................................................................... | 23 | 1 | 60.00 | 60.00 | 18.00 | 4.00 | 11.00 | 3.00 | 4.00 | 7.00 | - | 1.00 | 6.00 | - | 2.00 | - | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAAACTTGA...................................................................................... | 22 | 1 | 39.00 | 39.00 | 9.00 | 6.00 | 7.00 | 9.00 | - | - | - | 2.00 | - | - | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................TCGGAAAGGATTGGGAAACTTG....................................................................................... | 22 | 1 | 29.00 | 29.00 | 9.00 | 11.00 | 6.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TCGGAAAGGATTGGGAAACTT........................................................................................ | 21 | 1 | 12.00 | 12.00 | 1.00 | 4.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................GGAAAGGATTGGGAAACTTGA...................................................................................... | 21 | 1 | 11.00 | 11.00 | 5.00 | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 |
| ............................................................................................................................................TTCGGAAAGGATTGGGAAACTTG....................................................................................... | 23 | 1 | 8.00 | 8.00 | 2.00 | 1.00 | - | 1.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TCGGAAAGGATTGGGAAACTTGt...................................................................................... | 23 | t | 7.00 | 29.00 | 1.00 | 3.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................TTCGGAAAGGATTGGGAAACTT........................................................................................ | 22 | 1 | 6.00 | 6.00 | - | 1.00 | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................GGAAAGGATTGGGAAACTTGACa.................................................................................... | 23 | a | 6.00 | 2.00 | - | - | - | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAAACTTGACT.................................................................................... | 24 | 1 | 5.00 | 5.00 | - | - | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAA............................................................................................ | 16 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTCGGAAAGGATTGGGAAACTTGA...................................................................................... | 24 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAAAGGATTGGGAAACTTGAC..................................................................................... | 21 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GGAAAGGATTGGGAAACTTGAC..................................................................................... | 22 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTCGGAAAGGATTGGGAAACT......................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAAACTTGAC..................................................................................... | 23 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GGAAAGGATTGGGAAACTT........................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAAACTTGAa..................................................................................... | 23 | a | 1.00 | 39.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TTTCGGAAAGGATTGGGAAACT......................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAAACTTG....................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................................GAAAGGATTGGGAAACTTG....................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAAAGGATTGGGAAACTTGAga.................................................................................... | 22 | ga | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GGAAAGGATTGGGAAACTTG....................................................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AAAGGATTGGGAAACTTGAC..................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................TCGGAAAGGATTGGGAAACT......................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAAAGGATTGGGAAACTTGA...................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AAGGATTGGGAAACTTGA...................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TTTCGGAAAGGATTGGGA............................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................AGGTTCTCCTTTCCTTTGCAGa................................................. | 22 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TCGGAAAGGATTGGGAAACTTtaa..................................................................................... | 24 | taa | 1.00 | 12.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TCGGAAAGGATTGGGAAACTTGAC..................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................CGGAAAGGATTGGGAAACTTGACa.................................................................................... | 24 | a | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AATTTCAGAACTGAGACCAAACTGAAGTGATTAAAAAGTCTATTCTTCTTTAGCTAGTTGGAAACAAAATGGATGATCTCAGAACCCACTTCTAATGCCAGACTCAAAAAGATTACCCCAGTAGCCATTTCCTCTCTGGTTTCGGAAAGGATTGGGAAACTTGACTAATGCATGGTAACAGGTTCTCCTTTCCTTTGCAGGTTATGGATCTCAAAGGTCAAATGATCTACATCGTTGAATCCAGTGCCAT .....................................................................................................................((...(((((.........)))))..))((((((..((..((((((((((.....))))..))))))..))..))))))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|