| Gene: BC050789 | ID: uc008pmy.1_intron_13_0_chr3_74940432_r.5p | SPECIES: mm9 |
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(7) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| AGACTAAACGGAAAGTTTGTGGACAGTGCGAGAACAAAGCTGCTCTCCTTGTAAGTACACTACAGTGCAAGAGGACTAGAACTCTCACAGCTCCTTAAGCAACCCTCTCCCTCCTGACCCCGCTAGCACAGCCCCTTGCTGCTCCTTTTTATTATTGTTTCTCCATGGGATAGCAGGTAAGTTTAACATCTCCATATAGTCACTAAACATCATCCTCTCACTCTCTCTTAATAGCACCATTTAAAATCAT .............................................................................................................(((.(((.(((.((.((((........)))))).............((......)).))).))).)))......................................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) |
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| ..................................................GTAAGTACACTACAGTGCAAGAGGACTAGAACTCTCACAGCTCCTTAAGCAA.................................................................................................................................................... | 52 | 1 | 71.00 | 71.00 | 71.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................TAGCACCATTTAAAATCAgtgt | 22 | gtgt | 25.00 | 0.00 | - | 9.00 | 7.00 | 2.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | 1.00 | - | 1.00 | 1.00 |
| .......................................................................................................................................................................................................................................TAGCACCATTTAAAATCggtt | 21 | ggtt | 8.00 | 0.00 | - | - | 2.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - |
| ..........................................................................................................................................................................................................................................CACCATTTAAAATCAgtgt | 19 | gtgt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............GTTTGTGGACAGTGCGAGAACA...................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................GCACCATTTAAAATCAgtgt | 20 | gtgt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..ACTAAACGGAAAGTTTGTGGACAGT............................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................................TAGCACCATTTAAAATCgg | 19 | gg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| AGACTAAACGGAAAGTTTGTGGACAGTGCGAGAACAAAGCTGCTCTCCTTGTAAGTACACTACAGTGCAAGAGGACTAGAACTCTCACAGCTCCTTAAGCAACCCTCTCCCTCCTGACCCCGCTAGCACAGCCCCTTGCTGCTCCTTTTTATTATTGTTTCTCCATGGGATAGCAGGTAAGTTTAACATCTCCATATAGTCACTAAACATCATCCTCTCACTCTCTCTTAATAGCACCATTTAAAATCAT .............................................................................................................(((.(((.(((.((.((((........)))))).............((......)).))).))).)))......................................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) |
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| ........................................................................................................................AGCACAGCCCCTTGtacg................................................................................................................ | 18 | tacg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |