(4)
OTHER.mut
(5)
PIWI.ip
(3)
PIWI.mut
(1)
TDRD1.ip
(24)
TESTES

Sense strand
TCGTATATTATTTTATATGACCTATGAATTATTTTTATTTGTAATAACTATGAAAAAATCCAGGAAATGAAAGTGCCCTGTGTAAAGATGGACTCAATGGAAGAATTTGAAAGTTTGGATTCCCCAGAATTTGAGAATATATTTGTAGTTACTGACTTCCAGAATTCTGTCTTCAATGACTTATACAAGGCTGATTGTAGGATTGTTGGGCCACCAGTTATACTCAACTGTGCACAAAGGGGAGAGGTAA
..................................................................................................................................................(((((.(((....(((....)))...))).)))))..(((((......)))))...................................................
..............................................................................................................................127......................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
....................................................................................................................................................TTACTGACTTCCAGAATTCTGTCTTCAATGACTTATACAAGGCTGATTGTAG.................................................. 52 1 159.00 159.00 159.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................TACAAGGCTGATTGTAGGATTGTTGGG........................................ 27 1 6.00 6.00 - 1.00 3.00 - - 1.00 - - - 1.00 - - - - - - - - - - - - - -
......................................................................................GATGGACTCAATGGAAG................................................................................................................................................... 17 1 6.00 6.00 - - - - 6.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................TACAAGGCTGATTGTAGGATTGTTGG......................................... 26 1 5.00 5.00 - 1.00 1.00 - - 1.00 - - - 1.00 - - - - - - - 1.00 - - - - - -
.......................................................................................................................................................................................TACAAGGCTGATTGTAGGATTGTTGGt........................................ 27 t 4.00 5.00 - 1.00 - - - - - - - 1.00 - - - - 1.00 - - - - - - - - 1.00
...............................................................................................................................................................................................TGATTGTAGGATTGTTGGGCCACCAG................................. 26 1 4.00 4.00 - 1.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................TACAAGGCTGATTGTAGGATTGTTGGGC....................................... 28 1 3.00 3.00 - 1.00 - - - 1.00 - - 1.00 - - - - - - - - - - - - - - -
............................................................................................................................................................................TCAATGACTTATACAAGGCTGATTGTAGG................................................. 29 1 3.00 3.00 - 1.00 - - - - - - 2.00 - - - - - - - - - - - - - - -
...........................................................................................................................................................................................AGGCTGATTGTAGGATTGTTGG......................................... 22 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - -
.......................................................................................................................................................................................TACAAGGCTGATTGTAGGATTGTTGGGt....................................... 28 t 2.00 6.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - -
...................................................................................................................................TGAGAATATATTTGTAGTTACTGACTT............................................................................................ 27 1 2.00 2.00 - - - - - - - - - - - - 2.00 - - - - - - - - - - -
..................................................................................................................................................................................................TTGTAGGATTGTTGGGCCACCAGTTA.............................. 26 1 2.00 2.00 - - - - - - - - - - - - - - - 2.00 - - - - - - - -
.........................................................................................................................................................................................................ATTGTTGGGCCACCAGTTATACTCAACT..................... 28 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................CAATGGAAGAATTTGAAAGTTTGGATT................................................................................................................................. 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................TGACTTATACAAGGCTGATTGTAGGAT............................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................TAGGATTGTTGGGCCACCAGTTATACTCA........................ 29 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.......................................................................................................................................AATATATTTGTAGTTACTGACTTCCAGAA...................................................................................... 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................GTTATACTCAACTGTGCACAAAGGGG........ 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...............................................................................................................................................................................ATGACTTATACAAGGCTGATTGTAGG................................................. 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.............................................................................................TCAATGGAAGAATTTGAAAGTTTGGAT.................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................AAAGATGGACTCAATGGAA.................................................................................................................................................... 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...............................................................................GTGTAAAGATGGACTCAATGGAAGAAT................................................................................................................................................ 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................GTGCACAAAGGGGAGAG.... 17 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.........................................................................................................................................................................................CAAGGCTGATTGTAGGATTG............................................. 20 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................TGAAAGTGCCCTGTGTAAAGATGGACT............................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - -
..................................................................................................................................................................................ACTTATACAAGGCTGATTGTAGGATTG............................................. 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................CAATGACTTATACAAGGCTGATTGTAGGA................................................ 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................TGATTGTAGGATTGTTGGGCCA..................................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....................................................................................................AGAATTTGAAAGTTTGGATTCCCCAGA.......................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................ACAAGGCTGATTGTAGGATTGTTGGGtt...................................... 28 tt 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................TATATTTGTAGTTACTGACTTCCAGAAa..................................................................................... 28 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................TGTAGTTACTGACTTCCAGAATTCTGT................................................................................ 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................CTGATTGTAGGATTGTTGGGCCACC................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 -
..........................................................................................................................................................................................AAGGCTGATTGTAGGATT.............................................. 18 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...............................................................................................................................................................................ATGACTTATACAAGGCTGATTGTAGGATTG............................................. 30 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................ATATTTGTAGTTACTGACTTCCAGAA...................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.......................................................................................................................................................................................TACAAGGCTGATTGTAGGATTGTTGGaa....................................... 28 aa 1.00 5.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................TCAATGACTTATACAAGGCTGATTGTAGGAT............................................... 31 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................GAATTTGAAAGTTTGGATTCCCCAGA.......................................................................................................................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
........................................................................................................................................................................................ACAAGGCTGATTGTAGGATTGTTGGGC....................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................AGATGGACTCAATGGAAGAATT............................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................AAAGATGGACTCAATGGAAGAATT............................................................................................................................................... 24 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................AGGCTGATTGTAGGATTGTTGGGCCACC................................... 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................AAGGCTGATTGTAGGATTGTTGGGCCAC.................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
....................................................................................AAGATGGACTCAATGGAAGAATTT.............................................................................................................................................. 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..............................................................................TGTGTAAAGATGGACTCAATGGAAGA.................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - -
......................................................................................................................................................................................ATACAAGGCTGATTGTAGGATTGTTGt......................................... 27 t 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - -
................................................................AAATGAAAGTGCCCTGTGTAAAGATG................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.............................................................AGGAAATGAAAGTGCCCTGT......................................................................................................................................................................... 20 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................TTTGTAGTTACTGACTTCCAGAATTC................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...............................................................GAAATGAAAGTGCCCTGTGTAAAGATG................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...............................................................................GTGTAAAGATGGACTCAATGGAAGAA................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...........................................................................................................................................................................................AGGCTGATTGTAGGA................................................ 15 9 0.11 0.11 - - - - - - 0.11 - - - - - - - - - - - - - - - - -

Antisense strand
TCGTATATTATTTTATATGACCTATGAATTATTTTTATTTGTAATAACTATGAAAAAATCCAGGAAATGAAAGTGCCCTGTGTAAAGATGGACTCAATGGAAGAATTTGAAAGTTTGGATTCCCCAGAATTTGAGAATATATTTGTAGTTACTGACTTCCAGAATTCTGTCTTCAATGACTTATACAAGGCTGATTGTAGGATTGTTGGGCCACCAGTTATACTCAACTGTGCACAAAGGGGAGAGGTAA
..................................................................................................................................................(((((.(((....(((....)))...))).)))))..(((((......)))))...................................................
..............................................................................................................................127......................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesWT3()
Testes Data. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)