| Gene: 2310003C23Rik | ID: uc008ojy.1_intron_3_0_chr2_180451762_f.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(5) PIWI.ip |
(1) TDRD1.ip |
(18) TESTES |
| CTGAGGAGTCGCCTTTTGGAGACCTCCTTCACATGATGCAGAGGCAAAAGGTAAAGGGCCAGTAAAGGAAGAACAGAGTGCTTAGACACTCAGAGGACTTGTGAAAAGATGGTACTGTGCTGCGCTTGTGTTGGGGTGAAGCACATGGCTCTGGGCCAGGATACTCCAGTAGAACACTGGCAGCTCCACTGATCTGTCCCCTTTTACCTTGTGAGAGGAAGAGCAGCGCCATTGTGACTGTTAGTGTCTA ..........................................................................................(((((..(((.....))).......((((((.(((((......))))).))))))...))))).(((((..(((....))).....)))))..................................................................... .......................................................................................88..............................................................................................184................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ............................................................................................GAGGACTTGTGAAAAGATGGTACTGTG................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................TAGACACTCAGAGGACTTGTGAAAAGATG........................................................................................................................................... | 29 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - |
| .........................................................................................TCAGAGGACTTGTGAAAAGATGGTAC....................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGGACTTGTGAAAAGATGGTACTGTGC.................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TCAGAGGACTTGTGAAAAGATGGTACT...................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TCCTTCACATGATGCAGAG............................................................................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGAAAAGATGGTACTGTGCTGCGCTTG.......................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................GACACTCAGAGGACTTGTGAAAAGATGGT......................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................GTAAAGGAAGAACAGAGTGCTTAGACA.................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGGACTTGTGAAAAGATGGTACTGTGCTGC............................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................CTCAGAGGACTTGTGtgta............................................................................................................................................... | 19 | tgta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................TTAGACACTCAGAGGACTTGTGAAAAGATG........................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................AAGGAAGAACAGAGTGCTTAGACACT................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................CTTAGACACTCAGAGGACTTGTGAAAAGATGG.......................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................CTCAGAGGACTTGTGAAAAGATGGTAC....................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................CAGAGGACTTGTGAAAAGATGGTACTG..................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TTTTGGAGACCTCCTTCACATGATGCA.................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................CAGAGGACTTGTGAAAAGATGGTACTGT.................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TAGACACTCAGAGGACTTGTGAAAAGATGG.......................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................TGGGCCAGGATACTCCAGTAGAACACTGG...................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGGACTTGTGAAAAGATGGTACTGTGCT................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TAGACACTCAGAGGACTTGTGAAAAG.............................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................AAGGAAGAACAGAGTGCTTAGACACTCAGAGGA......................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGTTGGGGTGAAGCACATGGCTCTGGGCC............................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TAGACACTCAGAGGACTTGTGAAAAGA............................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................ACACTCAGAGGACTTGTGAAAAGATGG.......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................GAGGACTTGTGAAAAGATGGTACTGT.................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................CAGAGGACTTGTGAAAAGATGGTACT...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................CAAAAGGTAAAGGGCCAGTAAAGGA..................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................TTAGACACTCAGAGGACTTGTGAAAAGAT............................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................CCACTGATCTGTCCCCTTTTACCTTG....................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| CTGAGGAGTCGCCTTTTGGAGACCTCCTTCACATGATGCAGAGGCAAAAGGTAAAGGGCCAGTAAAGGAAGAACAGAGTGCTTAGACACTCAGAGGACTTGTGAAAAGATGGTACTGTGCTGCGCTTGTGTTGGGGTGAAGCACATGGCTCTGGGCCAGGATACTCCAGTAGAACACTGGCAGCTCCACTGATCTGTCCCCTTTTACCTTGTGAGAGGAAGAGCAGCGCCATTGTGACTGTTAGTGTCTA ..........................................................................................(((((..(((.....))).......((((((.(((((......))))).))))))...))))).(((((..(((....))).....)))))..................................................................... .......................................................................................88..............................................................................................184................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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