| Gene: Slc9a8 | ID: uc008nzo.1_intron_4_0_chr2_167269033_f.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| ACAGAATATTTCTCGCCGGGGGCCAGGGTGAGGGACCTGTGAGACAGGAAAGCAGAGAGATGGTGGCAGGGGTTCCAGCCAGCGGTGCAGGGCAGGCAACAGGCCAGCCTTGGAGAGACCACAGTTGAAGGAGGGCTGGTGCATCCTCCCTATCTTACCAGTTGGCCTCTTGTCCTTCTCACCCCTGCCCTGCCCCCCAGGGGAACTTCTTTCAGAACATCGGTTCCATCACTCTCTTCGCTGTCTTTGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................AGGCAACAGGCCAGCCTTGGAGAGACCACAGTTGAAGGAGGGCTGGTGCATC......................................................................................................... | 52 | 1 | 78.00 | 78.00 | 78.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TTCAGAACATCGGTTCCATCACTCTCT............. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TTCAGAACATCGGTTCCATCACTCTCTTC........... | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................ACATCGGTTCCATCACTCTCTTCGCTGT...... | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TCGGTTCCATCACTCTCTTCGCTGTC..... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................AACTTCTTTCAGAACATCGGTTCCATCACT................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................GGGACCTGTGAGACAGGAAA....................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................AACTTCTTTCAGAACATCGGTTCCATCACTCT............... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TCTTGTCCTTCTCACat.................................................................. | 17 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................GAACATCGGTTCCATCACTCTCTTCGCTGTC..... | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TTCCATCACTCTCTTCGCTGTCTTTGGaact | 31 | aact | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................GGAACTTCTTTCAGAACATCGGTTCC....................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GGGAACTTCTTTCAGAACATCGGT.......................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TTTCAGAACATCGGTTCCATCACTCTC.............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GAACATCGGTTCCATCACTCTCTT............ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TTCTTTCAGAACATCGGTTCCATCAC.................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TTCAGAACATCGGTTCCATCACTCTCTTCtt......... | 31 | tt | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TTCTTTCAGAACATCGGTTCCATC.................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CAGAACATCGGTTCCATCACTCTCTT............ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................................................................AGAACATCGGTTCCATCACTCTCTTCG.......... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGGGAACTTCTTTCAGAACATCGGTT......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TCAGAACATCGGTTCCATCACTCTCTTC........... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TTCAGAACATCGGTTCCATCACTCT............... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGAGGGACCTGTGAGA.............................................................................................................................................................................................................. | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| ACAGAATATTTCTCGCCGGGGGCCAGGGTGAGGGACCTGTGAGACAGGAAAGCAGAGAGATGGTGGCAGGGGTTCCAGCCAGCGGTGCAGGGCAGGCAACAGGCCAGCCTTGGAGAGACCACAGTTGAAGGAGGGCTGGTGCATCCTCCCTATCTTACCAGTTGGCCTCTTGTCCTTCTCACCCCTGCCCTGCCCCCCAGGGGAACTTCTTTCAGAACATCGGTTCCATCACTCTCTTCGCTGTCTTTGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................TGTCCTTCTCACCcctt................................................................... | 17 | cctt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |