| Gene: BC054394 | ID: uc008nzg.1_intron_0_0_chr2_166925361_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| CATTTGCATAGCTGGTCTTTTCTGCTGTCATTCCTTCCCACTGTCCCTTGGGCTGGTTTTTTGGTTTTGTTTTGTTTTGTTGGATTCCAGTTGTCTGGAGATGGGAAAAGACTGGGGTTTAATATCCTGGAAGATGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTCTTTCCTCATCAGGTCTATGTCCCCTGGCTGTCACTCTTAAGAATCCAGGTATGCAGGAGCAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................................TCTTAAGAATCCAGGTATGCAGGAGC.. | 26 | 1 | 6.00 | 6.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | 1.00 | - |
| ...........................................................................TTTGTTGGATTCCAGTTGTCTGGAGATGG.................................................................................................................................................. | 29 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGGCTGTCACTCTTAAGAATCCAGG............. | 25 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGGCTGTCACTCTTAAGAATCCAGGTA........... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TGGTTTTGTTTTGTTTTGTTGGATTCC.................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........AGCTGGTCTTTTCggat................................................................................................................................................................................................................................ | 17 | ggat | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TCTTAAGAATCCAGGTATGCAGGAGCA. | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CTGGCTGTCACTCTTAAGAATCCAGGTA........... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGGAGTTCCTAGCAATGGGTGGGTGA.......................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................TGTTTTGTTGGATTCCAGTTGTCTGGAG...................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGGAAGATGGAGTTCCTAGCAATGGG................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGTTTTGTTGGATTCCAGTTGTCTGGAGATGG.................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................AATATCCTGGAAGATGGAGTTCCTAG........................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TCTTAAGAATCCAGGTATGCAGGAGCAAgt | 30 | gt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TCTTAAGAATCCAGGTATGCAGGAGg.. | 26 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TCCTCATCAGGTCTATGTCCCCTGGC.................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TCTTAAGAATCCAGGTATGCAGGAGt.. | 26 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGTTTTGTTGGATTCCAGTTGTCTGGA....................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................GGTTTTTTGGTTTTGatc.................................................................................................................................................................................. | 18 | atc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGTTTTGTTGGATTCCAGTTGTCTGG........................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TTTTGTTTTGTTTTGTTGGATTCCAGT............................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTTTGTTTTGTTGGATTCCAGTTGTC........................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TTTGTTGGATTCCAGTTGTCTGGAGATtg.................................................................................................................................................. | 29 | tg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TAAGAATCCAGGTATGCAGGAGCtagc | 27 | tagc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TTTGGTTTTGTTTTGTTTTGTTGGAT..................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TTCCTCATCAGGTCTATGTCCCCTG.................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................TGGTTTTGTTTTGTTTTGTTGGATTCCA................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TTGTCTGGAGATGGGAAAAGACTGGG...................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGGAAGATGGAGTTCCTAGCAATGGGT................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TCCTGGAAGATGGAGTTCCTAGCAATG................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................AATATCCTGGAAGATGGAGTTCCTAGC....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| CATTTGCATAGCTGGTCTTTTCTGCTGTCATTCCTTCCCACTGTCCCTTGGGCTGGTTTTTTGGTTTTGTTTTGTTTTGTTGGATTCCAGTTGTCTGGAGATGGGAAAAGACTGGGGTTTAATATCCTGGAAGATGGAGTTCCTAGCAATGGGTGGGTGATGGGGGTCTGGGAGAGCAACTCTGTGTCTTTCCTCATCAGGTCTATGTCCCCTGGCTGTCACTCTTAAGAATCCAGGTATGCAGGAGCAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................GAAAAGACTGGGGTttca.................................................................................................................................... | 18 | ttca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |