(2)
OTHER.mut
(4)
PIWI.ip
(1)
PIWI.mut
(14)
TESTES

Sense strand
TTCCAAACCTTCAAAGGCCTCAAGTGGGACCATCATAACATCACATACTGGTGAGATGTCGGGCTAGAAGCAGGTGCCTGGGTGGGACTGGAGGCCAGTTTGCACCTCCGGTTAGCTGAACACAAGGGATCCTTAGCAATACAAGTTCCGAGAGAGGCTGCAGCCCTGTGTGTTTTGAAGCGATCGTGGTGTAGCTGCTGCCCCGCCCACCCCCATTTGTAATCCGTGCATGCCCGATCCCCCATCGACGCTGGCTTTTCACCTCCAGGATCCAAAACTACTCTGAAGACTTGCCGCGAGACATGATCGATGACGCCT
............................................................((((....(((((.(((((.(((((((((((...))))))).))))..(((((.((((((((((.(((((...((....))...)))))...((.(((....))))).)))))))...)))))))).)).))).)))))))))...................................................................................................................
..................................................51......................................................................................................................................................203.................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
...................................................TGAGATGTCGGGCTAGAAGCAGGTG.................................................................................................................................................................................................................................................. 25 1 8.00 8.00 4.00 3.00 - - - - - - - - - 1.00 - -
......................................................................................................................................................................................................................................................................................TACTCTGAAGACTTGCCGCGAGACATG............. 27 1 8.00 8.00 - - 5.00 - - 2.00 1.00 - - - - - - -
..............................................................................................................................................................................................................................................................................TCCAAAACTACTCTGAAGACTTGCCGC..................... 27 1 8.00 8.00 1.00 - 1.00 4.00 1.00 - 1.00 - - - - - - -
.........................................................................................................................................................................................................................................................................CAGGATCCAAAACTACTCTGAAGACTTGC........................ 29 1 6.00 6.00 1.00 4.00 - - - - - - - - - 1.00 - -
...................................TAACATCACATACTGGTGAGATGTCGGGC.............................................................................................................................................................................................................................................................. 29 1 6.00 6.00 4.00 1.00 - - - - - - - - - - 1.00 -
...................................................TGAGATGTCGGGCTAGAAGCAGGTGC................................................................................................................................................................................................................................................. 26 1 4.00 4.00 1.00 3.00 - - - - - - - - - - - -
...............................................................................................................................................................................TGAAGCGATCGTGGTGTAGCTGCTG...................................................................................................................... 25 1 4.00 4.00 2.00 2.00 - - - - - - - - - - - -
...................................................TGAGATGTCGGGCTAGAAGCAGGT................................................................................................................................................................................................................................................... 24 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................TCCAAAACTACTCTGAAGACTTGCCGCG.................... 28 1 3.00 3.00 - - - 2.00 - 1.00 - - - - - - - -
...................................TAACATCACATACTGGTGAGATGTCGGG............................................................................................................................................................................................................................................................... 28 1 3.00 3.00 3.00 - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................TTGCCGCGAGACATGATCGATGACGCC. 27 1 3.00 3.00 1.00 - - - 2.00 - - - - - - - - -
...............................................................................................................................................................................TGAAGCGATCGTGGTGTAGCTGCTGC..................................................................................................................... 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - -
...................................................TGAGATGTCGGGCTAGAAGCAGGTGt................................................................................................................................................................................................................................................. 26 t 2.00 8.00 - 2.00 - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................ACTACTCTGAAGACTTGCCGCGAGAC................ 26 1 2.00 2.00 - - - 1.00 1.00 - - - - - - - - -
...................................................................................................................................................................................................................................................................................................TGCCGCGAGACATGATCGATGACGCCT 27 1 2.00 2.00 - - - - 1.00 - 1.00 - - - - - - -
..................................................................................................................................................................................................................................................................................................TTGCCGCGAGACATGATCGATGACGC.. 26 1 2.00 2.00 - - - - - 1.00 - - 1.00 - - - - -
........................................................................................................................................................................................................................................................................CCAGGATCCAAAACTACTCTGAAGACTT.......................... 28 1 2.00 2.00 2.00 - - - - - - - - - - - - -
............................................................................................................................................................................TTTTGAAGCGATCGTGGTGTAGCTG......................................................................................................................... 25 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................TACTCTGAAGACTTGCCGCGAGACAT.............. 26 1 2.00 2.00 - - 1.00 - - - 1.00 - - - - - - -
........................................................................................................................................................................................................................................................................CCAGGATCCAAAACTACTCTGAAGACT........................... 27 1 2.00 2.00 2.00 - - - - - - - - - - - - -
....................................................GAGATGTCGGGCTAGAAGCAGGTGCC................................................................................................................................................................................................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
....................................................................................................TGCACCTCCGGTTAGCTGAACACAAGGGA............................................................................................................................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - -
..............................................ACTGGTGAGATGTCGGGCTAGAAGC....................................................................................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - -
...................................................................................................................................CTTAGCAATACAAGTTCCGAGAGAGGCTGC............................................................................................................................................................. 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................TCTGAAGACTTGCCGCGAGACATGATC.......... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - -
...................................................TGAGATGTCGGGCTAGAAGCAGGTGCC................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................CAGGATCCAAAACTACTCTGAAGACTTG......................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................CAAAACTACTCTGAAGACTTGCCGC..................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - -
..............................................................................................................................................................TGCAGCCCTGTGTGTTTTGAAGCGATC..................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - -
............................................ATACTGGTGAGATGTCGGGCTAGAAGt....................................................................................................................................................................................................................................................... 27 t 1.00 0.00 1.00 - - - - - - - - - - - - -
...................................TAACATCACATACTGGTGAGATGTCGG................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - -
...................................................TGAGATGTCGGGCTAGA.......................................................................................................................................................................................................................................................... 17 1 1.00 1.00 1.00 - - - - - - - - - - - - -
............................................ATACTGGTGAGATGTCGGGCTAGAA......................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
...............................................................................................................................................................................TGAAGCGATCGTGGTGTAGCTGCTGCCCC.................................................................................................................. 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................CTTTTCACCTCCAGcttg.............................................. 18 cttg 1.00 0.00 - - - - - - - 1.00 - - - - - -
...............................................................................................................................................................................TGAAGCGATCGTGGTGTAGCTGCTGCCC................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................TTGAAGCGATCGTGGTGTAGCTGCT....................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................TGCCGCGAGACATGATCGATGACGCC. 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - -
..............................................ACTGGTGAGATGTCGG................................................................................................................................................................................................................................................................ 16 1 1.00 1.00 1.00 - - - - - - - - - - - - -
..............................................ACTGGTGAGATGTCGGGCTAGAAGCAGGT................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................CAAAACTACTCTGAAGACTTGC........................ 22 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................CAGGATCCAAAACTACTCTGAAGACTTGt........................ 29 t 1.00 1.00 - 1.00 - - - - - - - - - - - -
...................................................TGAGATGTCGGGCTAGAAGCAGGTGCCT............................................................................................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - -
....................................................GAGATGTCGGGCTAGAAGCAGGTG.................................................................................................................................................................................................................................................. 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
.....................................ACATCACATACTGGTGAGATGTCGGG............................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................GGATCCAAAACTACTCTGAAGACTTGCC....................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
........................................................................................................................................................................................CGTGGTGTAGCTGCTGCCCCGCCCACt........................................................................................................... 27 t 1.00 0.00 - 1.00 - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................CTTGCCGCGAGACATGATCGATGACGCC. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................CCAGGATCCAAAACTACTCTGAAGACTTGC........................ 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
.............................................TACTGGTGAGATGTCGGGCTAGAAGC....................................................................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - -
...................................................TGAGATGTCGGGCTAGAAGCAGGTGCaa............................................................................................................................................................................................................................................... 28 aa 1.00 4.00 - - - - - - - - 1.00 - - - - -
.....................................ACATCACATACTGGTGAGATGTCGGGCTt............................................................................................................................................................................................................................................................ 29 t 1.00 0.00 - 1.00 - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................TTGCCGCGAGACATGATCGATGACGCCT 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - -
............................................ATACTGGTGAGATGTCGGGCTAGAAGCAGt.................................................................................................................................................................................................................................................... 30 t 1.00 0.00 - 1.00 - - - - - - - - - - - -
............................................ATACTGGTGAGATGTCGGGCTAGAAGC....................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
................................................................TAGAAGCAGGTGCCTGGGTGGGACTa.................................................................................................................................................................................................................................... 26 a 1.00 0.00 1.00 - - - - - - - - - - - - -
........................................................TGTCGGGCTAGAAGCAGGTGC................................................................................................................................................................................................................................................. 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
........................................................................................................................................................................TGTGTTTTGAAGCGATCGTGGTGTAG............................................................................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
..................................................GTGAGATGTCGGGCTAGAAGCAGG.................................................................................................................................................................................................................................................... 24 1 1.00 1.00 1.00 - - - - - - - - - - - - -
......................................................................................................................................AGCAATACAAGTTCCGAGAGAGGCTG.............................................................................................................................................................. 26 1 1.00 1.00 1.00 - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................TGAAGACTTGCCGCGAGACATGATCGAT....... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - -
.......................................................................................................................................................................GTGTGTTTTGAAGCGATCGTGGT................................................................................................................................ 23 1 1.00 1.00 1.00 - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................TCCAAAACTACTCTGAAGACTTGCCG...................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - -
...........................................................................................................................................TACAAGTTCCGAGAGAGGCTGCAGCCCT....................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................TACTCTGAAGACTTG......................... 15 7 0.14 0.14 - - - - - - - - - - - - 0.14 -

Antisense strand
TTCCAAACCTTCAAAGGCCTCAAGTGGGACCATCATAACATCACATACTGGTGAGATGTCGGGCTAGAAGCAGGTGCCTGGGTGGGACTGGAGGCCAGTTTGCACCTCCGGTTAGCTGAACACAAGGGATCCTTAGCAATACAAGTTCCGAGAGAGGCTGCAGCCCTGTGTGTTTTGAAGCGATCGTGGTGTAGCTGCTGCCCCGCCCACCCCCATTTGTAATCCGTGCATGCCCGATCCCCCATCGACGCTGGCTTTTCACCTCCAGGATCCAAAACTACTCTGAAGACTTGCCGCGAGACATGATCGATGACGCCT
............................................................((((....(((((.(((((.(((((((((((...))))))).))))..(((((.((((((((((.(((((...((....))...)))))...((.(((....))))).)))))))...)))))))).)).))).)))))))))...................................................................................................................
..................................................51......................................................................................................................................................203.................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
.........................................................................................................................................................................................................................................................GCTGGCTTTTCACCTCCAGGATCCAA........................................... 26 1 4.00 4.00 3.00 1.00 - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................GCTTTTCACCTCCAGGATCCAAAACTA...................................... 27 1 3.00 3.00 - 3.00 - - - - - - - - - - - -
....................................................................................................................................................................................................GCTGCCCCGCCCACCCCCATTTGTA................................................................................................. 25 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - -
.........................................................................................................................................................................................................................................................GCTGGCTTTTCACCTCCAGGATCCA............................................ 25 1 2.00 2.00 2.00 - - - - - - - - - - - - -
......................................................................................................................................ATACAAGTTCCGAGAGActtg................................................................................................................................................................... 21 cttg 2.00 0.00 - - - - - - - 1.00 - - 1.00 - - -
....AAACCTTCAAAGGCCTCAAGTGGGACCA.............................................................................................................................................................................................................................................................................................. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - -
..............................................................................................................................GGATCCTTAGCAATACAAGTTCCGA....................................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
...............................................................................................................................GATCCTTAGCAATACAAGTTCCGA....................................................................................................................................................................... 24 1 1.00 1.00 1.00 - - - - - - - - - - - - -
...................................................................................................................................................................................................................CCCATTTGTAATCCGTGCATGCCCGA................................................................................. 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - -
......................................................................................................................AACACAAGGGATCCTTAGCAATACA............................................................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
..........................................................................................................................................................................................................CGCCCACCCCCATTTGTAATCCGTa........................................................................................... 25 a 1.00 0.00 1.00 - - - - - - - - - - - - -
..................CTCAAGTGGGACCATCATAACATCACA................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - -
..................................................................................................................GCTGAACACAAGGGATCCTTAGCAA................................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - -
....................................................................................................................................................................................................................CCATTTGTAATCCGTGCATGCCCGAT................................................................................ 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - -
................................................................................................................................................................................................................ACCCCCATTTGTAATCCGTGCATG...................................................................................... 24 1 1.00 1.00 1.00 - - - - - - - - - - - - -
............................................................................................................................................................................................................GCCCACCCCCATTTGTAATCCGTGCA........................................................................................ 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - -
.....................................................................................................................................................................CTGTGTGTTTTGAAGCGATCGTGGTGTA............................................................................................................................. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
................GCCTCAAGTGGGACCATCATAACATCACA................................................................................................................................................................................................................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................TCTGAAGACTTGCCGCGAGACATGA............ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
........................................................................................................................................ATACAAGTTCCGAGAGAct................................................................................................................................................................... 19 ct 1.00 0.00 - - - - - - - - - - 1.00 - - -
....................................................................................................................................................................................................CTGCCCCGCCCACCCCCATTTGTAa................................................................................................. 25 a 1.00 0.00 - - - - - - - - - 1.00 - - - -
................................................................................................................................................................................................................................................CCCATCGACGCTGGCTTTTCACCTCCA................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................TCACCTCCAGGATCCAAAACTACTCT.................................. 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................CTTTTCACCTCCAGGATCCAAAACTA...................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
..............................................................................................................................GGATCCTTAGCAATACAAGTTCCGAGA..................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
........................................................................................................................................................................................................................................CCCGATCCCCCATCGACGCTGGC............................................................... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - -
.......................................................................................................................................................................................................................................GCCCGATCCCCCATCGACGCTGG................................................................ 23 1 1.00 1.00 1.00 - - - - - - - - - - - - -
...........................................................................................................................................TACAAGTTCCGAGA..................................................................................................................................................................... 14 5 0.20 0.20 - - - - - - - - - - - - - 0.20