| Gene: Zhx3 | ID: uc008nre.1_intron_0_0_chr2_160597362_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(16) TESTES |
| AGCCAGCATCTTGTCCTTGACCCACACTCTGCTCTTTCACCTCCTCTCAGGCTGGAGGGGACAGTGGCCTGGCATTCCTCGTGGAATTAAGGAGTCCCCAACTCCAGTGATACCAGCCCAGGATAGTGAGGATAGGACATCCCTGGGGACTGTACACGTTGTAGCTGCCATGGAGTGACAGGTATGTGTTTTCTCCTCAGAAGCAGACTGAATTTGATCTTGATTACTGTGAAGGACCGGCCAGTCTGGG .................................................................................................................((((((.((((.((.........))))))...))).))).((((...(((.(((.(((...))).))).)))))))............................................................. ...............................................................................................................112................................................................................195..................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................TGATCTTGATTACTGTGAAGGACCGGC......... | 27 | 1 | 28.00 | 28.00 | 11.00 | - | 4.00 | 6.00 | 3.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................CCCAGGATAGTGAGGATAGGACATCCCTGGGGACTGTACACGTTGTAGCTGC.................................................................................. | 52 | 1 | 27.00 | 27.00 | - | 27.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCTTGATTACTGTGAAGGACCGGCCA....... | 26 | 1 | 18.00 | 18.00 | 3.00 | - | 8.00 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGATCTTGATTACTGTGAAGGACCGGCC........ | 28 | 1 | 17.00 | 17.00 | 8.00 | - | 2.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGATTACTGTGAAGGACCGGCCAGTC.... | 26 | 1 | 11.00 | 11.00 | 1.00 | - | 4.00 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - |
| ......................................................................................................................................................................................................................TGATCTTGATTACTGTGAAGGACCGGCCA....... | 29 | 1 | 5.00 | 5.00 | 2.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................ATCTTGATTACTGTGAAGGACCGGCC........ | 26 | 1 | 5.00 | 5.00 | - | - | 1.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................AAGCAGACTGAATTTGATCTTGATTAC....................... | 27 | 1 | 4.00 | 4.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| .................................................................................................................................................................................................................GAATTTGATCTTGATTACTGTGAAGGAC............. | 28 | 1 | 4.00 | 4.00 | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................................................AAGCAGACTGAATTTGATCTTGATTACT...................... | 28 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TTTGATCTTGATTACTGTGAAGGACCGGC......... | 29 | 1 | 3.00 | 3.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GATCTTGATTACTGTGAAGGACCGGC......... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GATCTTGATTACTGTGAAGGACCGGCC........ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................ATCTTGATTACTGTGAAGGACCGGCCA....... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TGTGTTTTCTCCTCAGAAGCAGACTGAA...................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................AATTTGATCTTGATTACTGTGAAGGAC............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGATTACTGTGAAGGACCGGCCAG...... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGATTACTGTGAAGGACCGGCCAGTCT... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TACTGTGAAGGACCGGC......... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................................................................................................GATTACTGTGAAGGACCGGCCAGTC.... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GAATTTGATCTTGATTACTGTGAAGGA.............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................GAATTTGATCTTGATTACTGTGAAGG............... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCTTGATTACTGTGAAGGACCGGCCAGTCT... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TTTGATCTTGATTACTGTGAAGGACC............ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TTGATCTTGATTACTGTGAAGGACCGGCt........ | 29 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................CTGAATTTGATCTTGATTACTGTGAAG................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................CCATGGAGTGACAGGTATGTGTaa........................................................... | 24 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TGAATTTGATCTTGATTACTGTGAAGG............... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TACTGTGAAGGACCGGCC........ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCTTGATTACTGTGAAGGACCGGCCAG...... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TTGATTACTGTGAAGGACCGGCCA....... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TTGATTACTGTGAAGGACCGGCCAGTCT... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................GACTGAATTTGATCTTGATTACTGTG................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGCCAGCATCTTGTCCTTGACCCACACTCTGCTCTTTCACCTCCTCTCAGGCTGGAGGGGACAGTGGCCTGGCATTCCTCGTGGAATTAAGGAGTCCCCAACTCCAGTGATACCAGCCCAGGATAGTGAGGATAGGACATCCCTGGGGACTGTACACGTTGTAGCTGCCATGGAGTGACAGGTATGTGTTTTCTCCTCAGAAGCAGACTGAATTTGATCTTGATTACTGTGAAGGACCGGCCAGTCTGGG .................................................................................................................((((((.((((.((.........))))))...))).))).((((...(((.(((.(((...))).))).)))))))............................................................. ...............................................................................................................112................................................................................195..................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AGCATCTTGTCCTagta......................................................................................................................................................................................................................................... | 17 | agta | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................GACAGGTATGTGTTTTCTCCTCAGAAGCA............................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................CCAGTGATACCAGCCCAGGATAGTGA......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |