| Gene: Ndrg3 | ID: uc008nof.1_intron_7_0_chr2_156766150_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(10) TESTES |
| TTAACATTGACCCGTGTGCTAAGGGCTGGATTGACTGGGCAGCTTCCAAAGTAAGTACTGGGTGGTTGTGTGTGTCTGCTCATTCTCTGGTCCCTTAGAAATTGACCTTTACACAGTTTAAGGGCACAATGTGAAGTTTTGTTTTGTTGAGCATGGTGAACTGAACATGTTATGTAGGTATTTCTAACATCCAGCTTTAACAACAGCCCCGCTCGAAAGGTTTTAGGTGTGCAACTTACAAATATTTACA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGTACTGGGTGGTTGTGTGTGTCTGCTCATTCTCTGGTCCCTTAGAAAT.................................................................................................................................................... | 52 | 1 | 21.00 | 21.00 | 21.00 | - | - | - | - | - | - | - | - | - |
| ............CGTGTGCTAAGGGCTGt............................................................................................................................................................................................................................. | 17 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ................TGCTAAGGGCTGGATTGACTGGGCAG................................................................................................................................................................................................................ | 26 | 2 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ............CGTGTGCTAAGGGCTGGATTGACTGGGCA................................................................................................................................................................................................................. | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - |
| .....ATTGACCCGTGTGCTAAGGGCTGGATTGA........................................................................................................................................................................................................................ | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 |
| ..............................TTGACTGGGCAGCTTCCAAA........................................................................................................................................................................................................ | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - |
| ........GACCCGTGTGCTAAGGGCTGGATTGACTGGG................................................................................................................................................................................................................... | 31 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - |
| ...................TAAGGGCTGGATTGACTGGGCA................................................................................................................................................................................................................. | 22 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - |
| TTAACATTGACCCGTGTGCTAAGGGCTGGATTGACTGGGCAGCTTCCAAAGTAAGTACTGGGTGGTTGTGTGTGTCTGCTCATTCTCTGGTCCCTTAGAAATTGACCTTTACACAGTTTAAGGGCACAATGTGAAGTTTTGTTTTGTTGAGCATGGTGAACTGAACATGTTATGTAGGTATTTCTAACATCCAGCTTTAACAACAGCCCCGCTCGAAAGGTTTTAGGTGTGCAACTTACAAATATTTACA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................GGCAGCTTCCAAAGgtgt....................................................................................................................................................................................................... | 18 | gtgt | 2.00 | 0.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - |
| .................................GGCAGCTTCCAAAGgttt....................................................................................................................................................................................................... | 18 | gttt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................GGCAGCTTCCAAAGgtta....................................................................................................................................................................................................... | 18 | gtta | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - |