| Gene: 8430427H17Rik | ID: uc008nhw.1_intron_5_0_chr2_153309579_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(12) TESTES |
| CTTTCAAATCATCAGCAGAGTCTCCTGGGACGCTGAGAGAGCCTTTAAAGGTTTGTCCTTCATTCTATGTTTCCATCTCTCAGTGGGTTTTAAATCTCTCCACCTTCCAGCCCCTCCTCCGCAGCAGGGGCTGACTCCTCCCCAGTGGTGGTCCTTTTAGTTCCACTCAGGGTTGGAATAGAACTTTGGCAAGTACCTCTCCTGAAACTTCCCCAACTTAAGTCCTGGCCAAAATGATTACAATGGGGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................GGTCCTTTTAGTTCCACTCAGGGTTGGAATAGAACTTTGGCAAGTACCTCTC................................................. | 52 | 1 | 64.00 | 64.00 | 64.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TAGAACTTTGGCAAGTACCTCTCCTG.............................................. | 26 | 1 | 5.00 | 5.00 | - | 1.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................TAGAACTTTGGCAAGTACCTCTCCTGA............................................. | 27 | 1 | 5.00 | 5.00 | - | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................GAATAGAACTTTGGCAAGTA....................................................... | 20 | 1 | 4.00 | 4.00 | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TAGAACTTTGGCAAGTACCTCTCCT............................................... | 25 | 1 | 3.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................GAGAGAGCCTTTAAAGGTTTGTCCTTCATTC......................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................TAGAACTTTGGCAAGTACCTCTCCTGAAAC.......................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................TCTCCTGAAACTTCgtgt................................... | 18 | gtgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................TCCTGGGACGCTGAGAGAGCCTTT............................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................TGGGACGCTGAGAGAGCCTTTAAAGGTT..................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................TAAATCTCTCCACCTTCCAGCCCCTCC..................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| CTTTCAAATCATCAGCAGAGTCTCCTGGGACGCTGAGAGAGCCTTTAAAGGTTTGTCCTTCATTCTATGTTTCCATCTCTCAGTGGGTTTTAAATCTCTCCACCTTCCAGCCCCTCCTCCGCAGCAGGGGCTGACTCCTCCCCAGTGGTGGTCCTTTTAGTTCCACTCAGGGTTGGAATAGAACTTTGGCAAGTACCTCTCCTGAAACTTCCCCAACTTAAGTCCTGGCCAAAATGATTACAATGGGGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................TCCACCTTCCAGCCCCTCCTCCGCAG.............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................AAGTCCTGGCCAAAATGATTACAA....... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................TCCTTCATTCTATGTTTCCATCTCTCA........................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................CAGCCCCTCCTCCGCagga................................................................................................................................ | 19 | agga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................GACTCCTCCCCAGTGGTGGTCCTTTTA........................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |