| Gene: 4930519N13Rik | ID: uc008muu.1_intron_4_0_chr2_150775084_r | SPECIES: mm9 |
|
|
|
(2) OTHER.mut |
(4) PIWI.ip |
(3) PIWI.mut |
(18) TESTES |
| TAACAGGCCAAGGCCAGAAGCTGCCCTTGCCTGTTCATCCACAGATGCTGGAGCCATCGTTAGGCACAACTGCTCTGGACAGGAAGGCAGCCTCTGTTGGGGTTCAGGGACAAGCTTCAGAGGGGCCTGTTGGGGATGGTGAAGGTGTCCAAGAGGCTTGGCTCCAGTTCAGGGGAGAAGCTACAAGGATGAGACCCTCATTGCCCTGCTCTGAGCTCCCAAACCCACAAGAGGCCACAGTGATGCCGGCGATGTCAGAGAGTGAGATGAAGGATGTGAAGATCAAACTTCTGCAGCTGGAAGATGTCGTCCGGGCTCTTGAAAAGGCAGATTCCAGAGAGAGTTACAGGTTTGTCACTCCTAATCTTAAAGCTGTATATGAAGTCCTCA .....................................................................................................................................................................................................................................................(((((((((((....(((.....((((..((.......))..))))....)))....))))))).)))).((((.(((........))).))))................................................... ................................................................................................................................................................................................................................................241................................................................................................340................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................TGCTCTGGACAGGAAGGCAGCCTCTGT..................................................................................................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TAGGCACAACTGCTCTGGACAGGAAGGC.............................................................................................................................................................................................................................................................................................................. | 28 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................................................................................GTTGGGGATGGTGAAGGTt................................................................................................................................................................................................................................................... | 19 | t | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TGCTCTGGACAGGAAGGCAGCCTCTG...................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TGCTCTGGACAGGAAGGCAGCCTtt....................................................................................................................................................................................................................................................................................................... | 25 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................AGGCACAACTGCTCTGGACAGGAAGGC.............................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................CAACTGCTCTGGACAGGAAGGCAGCCT......................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................GTTGGGGATGGTGAAGGT.................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TCTGGACAGGAAGGCAGCCTCTGTTG................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................TGGAAGATGTCGTCCGG............................................................................ | 17 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................TGATGCCGGCGATGTCAGAGAGTGA............................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................AGAGAGTGAGATGAAGGATGTGAAGA............................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................AAAAGGCAGATTCCAGAGAGAGTTAC........................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................ACAACTGCTCTGGACAGGAAGGCAGCCT......................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................TAGGCACAACTGCTCTGGACAGGAAGGCA............................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TGAGATGAAGGATGTGAAGATCAAAC...................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................AGTGATGCCGGCGATGTCAGAGAGTGAG............................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................AACTGCTCTGGACAGGAAGGC.............................................................................................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................TCCGGGCTCTTGAAAAGGCAGATTCCA...................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................AGAGGGGCCTGTTGGGGATGGT.......................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................TCAAACTTCTGCAGCTGGAAGATGTCGTC............................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................TGTCAGAGAGTGAGATGAAGGATG.................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................CAACTGCTCTGGACAGGAAGGCAGCCTt........................................................................................................................................................................................................................................................................................................ | 28 | t | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................GCGATGTCAGAGAGTGAGATGAAGGAT................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TGCTGGAGCCATCGTTAGGCACAACTGC............................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| TAACAGGCCAAGGCCAGAAGCTGCCCTTGCCTGTTCATCCACAGATGCTGGAGCCATCGTTAGGCACAACTGCTCTGGACAGGAAGGCAGCCTCTGTTGGGGTTCAGGGACAAGCTTCAGAGGGGCCTGTTGGGGATGGTGAAGGTGTCCAAGAGGCTTGGCTCCAGTTCAGGGGAGAAGCTACAAGGATGAGACCCTCATTGCCCTGCTCTGAGCTCCCAAACCCACAAGAGGCCACAGTGATGCCGGCGATGTCAGAGAGTGAGATGAAGGATGTGAAGATCAAACTTCTGCAGCTGGAAGATGTCGTCCGGGCTCTTGAAAAGGCAGATTCCAGAGAGAGTTACAGGTTTGTCACTCCTAATCTTAAAGCTGTATATGAAGTCCTCA .....................................................................................................................................................................................................................................................(((((((((((....(((.....((((..((.......))..))))....)))....))))))).)))).((((.(((........))).))))................................................... ................................................................................................................................................................................................................................................241................................................................................................340................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................GCCTCTGTTGGGGTggg............................................................................................................................................................................................................................................................................................... | 17 | ggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................CTCCCAAACCCACAAgtga................................................................................................................................................................ | 19 | gtga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |