| Gene: Cd93 | ID: uc008mte.1_intron_0_0_chr2_148267004_r | SPECIES: mm9 |
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(1) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| TCCTGGGTTCCAGAGCGAGCAGAGAGCCAAGCCCCGGAGAATCAGTACAGGTAAAGTGCCATAGGTTACTTGGGTAGCTGGGCAGCCAGATGTAGGCCTGGGAGGCACAGACCACAGAACTGAGAGCAGAGACAAACAGTCAGCAGGCCATTTGTTGTTTAAAGCCAACCTCAGCAGCCCAGTCCAAAAGTGCCTATCTGTCCTATGAGTTCATGTGGAGTAGCGGCAAGGGGACCAAGGATGCAGATATGGCAGAGTTCCATGGCATCTCACACTGTAATCTTCTGTTTTCCACAGCCCAACACCAGGGACAGACTGCTGAAGACTATGTGGCCTTAGAGACAGCT ........................................................................................................((((...((((((((((.((..(((((((.....)))...(((.(((((((((((.............)))))).........)))))))).))))..))...))))).))))).)).))........................................................................................................................... ......................................................................................................103...............................................................................................................................233................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................................................................................................................................TGAAGACTATGTGGCCTTAGAGACAGC. | 27 | 1 | 7.00 | 7.00 | - | 4.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................TATGAGTTCATGTGGAGTAGCGGCAA...................................................................................................................... | 26 | 1 | 6.00 | 6.00 | 2.00 | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................CAGACCACAGAACTGAGAGCAGAGAC...................................................................................................................................................................................................................... | 26 | 1 | 6.00 | 6.00 | 2.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGAGTTCATGTGGAGTAGCGGCAA...................................................................................................................... | 24 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TGGCATCTCACACTGTAATCTTCTGTT.......................................................... | 27 | 1 | 5.00 | 5.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................TGAGTTCATGTGGAGTAGCGGCAAG..................................................................................................................... | 25 | 1 | 5.00 | 5.00 | 1.00 | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATGAGTTCATGTGGAGTAGCGGCA....................................................................................................................... | 25 | 1 | 4.00 | 4.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................TGCTGAAGACTATGTGGCCTTAGAGAC.... | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GTGGAGTAGCGGCAAGGGGACCAAGGA.......................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................GCATCTCACACTGTAATCTTCTGTTTTCCACAG.................................................. | 33 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................CACAGAACTGAGAGCAGAGACAAA................................................................................................................................................................................................................... | 24 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TGGCATCTCACACTGTAATCTTCTGT........................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................CCAGGGACAGACTGCTGAAGACTATGT................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CAGACCACAGAACTGAGAGCAGAGACA..................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................CCACAGAACTGAGAGCAGAGACAA.................................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TGGCATCTCACACTGTAATCTTCTGTTT......................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AGCGAGCAGAGAGCCAAGCCCCGGAG.................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AAGCCCCGGAGAATCAGTACAGccca..................................................................................................................................................................................................................................................................................................... | 26 | ccca | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................TTCCACAGCCCAACAgcc........................................ | 18 | gcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................TGAAGACTATGTGGCCTTAGAGACAG.. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AGTAGCGGCAAGGGGA................................................................................................................. | 16 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CAGACCACAGAACTGAGAGCAGAGACAA.................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................CACCAGGGACAGACTGCTGAAGACTAT.................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TCAGTACAGGTAAAGTGCCATAGGT......................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................................................................................................................................................................TGGCATCTCACACTGTAATCTTCTGTa.......................................................... | 27 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGAGTTCATGTGGAGTAGCGGCAAGGG................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................TCAGTACAGGTAAAGTGCCATAGGTTA....................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATGAGTTCATGTGGAGTAGCGGCAt...................................................................................................................... | 26 | t | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................ACAGACTGCTGAAGACTATGTGGCCT........... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TCCAGAGCGAGCAGAGAGCCAAGCCCC........................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TAGGTTACTTGGGTAGCTGGGCAGC..................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CAGACCACAGAACTGAGAGCAGAGA....................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................GACCACAGAACTGAGAGCAGAGACAAAC.................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................GACCACAGAACTGAGAGCAGAGACAAACt................................................................................................................................................................................................................. | 29 | t | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................AGGGACAGACTGCTGAAGACTATGTGGCC............ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...TGGGTTCCAGAGCGAGCAGAGAGCCAAa............................................................................................................................................................................................................................................................................................................................ | 28 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................CCACAGAACTGAGAGCAGAGACAAACA................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................TGCTGAAGACTATGTGGCCTTAGAGA..... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGAGTTCATGTGGAGTAGCGGCA....................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................ACTGCTGAAGACTATGTGGCCTTAGA....... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AGCGAGCAGAGAGCCtaa............................................................................................................................................................................................................................................................................................................................ | 18 | taa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................AGGGACAGACTGCTGAAGACTATGTGGC............. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................GACCACAGAACTGAGAGCAGAGACAAA................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................ACTGCTGAAGACTATGTGGCCTTAGAG...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................GATATGGCAGAGTTgttt.................................................................................... | 18 | gttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................TAAAGTGCCATAGGTTACTTGGGTAGC............................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................ACAGACCACAGAACTGAGAGCAGAGAC...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATGAGTTCATGTGGAGTAGCGG......................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TCCTGGGTTCCAGAGCGAGCAGAGAGCCAAGCCCCGGAGAATCAGTACAGGTAAAGTGCCATAGGTTACTTGGGTAGCTGGGCAGCCAGATGTAGGCCTGGGAGGCACAGACCACAGAACTGAGAGCAGAGACAAACAGTCAGCAGGCCATTTGTTGTTTAAAGCCAACCTCAGCAGCCCAGTCCAAAAGTGCCTATCTGTCCTATGAGTTCATGTGGAGTAGCGGCAAGGGGACCAAGGATGCAGATATGGCAGAGTTCCATGGCATCTCACACTGTAATCTTCTGTTTTCCACAGCCCAACACCAGGGACAGACTGCTGAAGACTATGTGGCCTTAGAGACAGCT ........................................................................................................((((...((((((((((.((..(((((((.....)))...(((.(((((((((((.............)))))).........)))))))).))))..))...))))).))))).)).))........................................................................................................................... ......................................................................................................103...............................................................................................................................233................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................AAAGTGCCTATCTGTCCTATGAGTTCA...................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................TCCACAGCCCAACACCAGGGACA.................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AGTCCAAAAGTGCCT........................................................................................................................................................ | 15 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | - | - | 0.75 | - | - | - |