| Gene: 8430406I07Rik | ID: uc008mqs.1_intron_3_0_chr2_144104863_f | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(17) TESTES |
| TTGTGGCGTACATGGGTGCCGTAAACCATGATGCCCACTACAGTTTTCAGGTCAGAACATGAGCTCCTGCGTGATAAGCTGGTTGTGGTGGTTTGGGTTTTACTCGTACTTAAAGCACTGCTTACTGCTGTTCAGCGTTCTCTAACTACAGCGCACTCTCCTCCCCTCCTGGGCTACTGCTGCTGTTTGGTTGGTTTGGGTTTTTGCCTTGCTTTGCTGCTTCGTGAGCACGGTCCATTCTTCAGGGTCTGTCGGCCATCTTTGTGCTCTCCTGTGTCCTGGTGCAGTCTTTAACCGGCCCATCTTAGCAGTGGGTTTGGAGATACTCCTATAGCATGCTTAGCACTGGCTAATTTGCCCTGGCACGAGAGGAAGTGCTGAAGCTGCACTGTGTTTCTCTGTAGGTTCAGTGTGGATTAATTGTGGTGGCCTATAAGGATGGGTCCCCTGCGCA ...................................................................................................................................................................................................................................................................................................................((((((.(((.((((...))))...)))..((((((((((..((....(((....)))....))..)))))))).))..)))))).............................................................. ................................................................................................................................................................................................................................................................................................................305................................................................................................404................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTAATTGTGGTGGCCTATAAGG................ | 26 | 1 | 3.00 | 3.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................TGGCACGAGAGGAAGTGCTGAAGCTGC................................................................... | 27 | 1 | 3.00 | 3.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTAATTGTGGTGGCCTATAAGGA............... | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................TACAGTTTTCAGGTCAGAACATGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTGTAGGTTCAGTGTGGATTAAT................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................GTTTTCAGGTCAGAACATGAGCTCC................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................TGTGCTCTCCTGTGTCCTGGTGCAGT...................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................TTTGTGCTCTCCTGTGTCCTGGTGCA........................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TCAGAACATGAGCTCCTGCGTGATAAG........................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTGCACTGTGTTTCTCTGTAGG................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................GCCTTGCTTTGCTGaggt....................................................................................................................................................................................................................................... | 18 | aggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................TACAGTTTTCAGGTCAGAACATGAGC...................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGTGGATTAATTGTGGTGGCCT...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGTTCAGCGTTCTCTAACTACAGCGCACTC........................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGCTGCTGTTTGGTTGGTTTGGGT............................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................TGTGTCCTGGTGCAGTCTTTAACCGGCC.......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TGGGCTACTGCTGCTGTTTGGTTGGT................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TACTTAAAGCACTGCTTACTGCTcttc................................................................................................................................................................................................................................................................................................................................. | 27 | cttc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TTGTGGTGGTTTGGagtg.................................................................................................................................................................................................................................................................................................................................................................. | 18 | agtg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................TGTAGGTTCAGTGTGGATTAATTGTG............................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................TACAGTTTTCAGGTCAGAACATGAGCTC.................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTGTAGGTTCAGTGTGGATTAA.................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................................................................................................TCTTTGTGCTCTCCTGTGTCCTGGTG.......................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................TCCATTCTTCAGGGTCTGTCGGCCATCTT................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGATGCCCACTACAGTTTTCAGGTCAGt.............................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGTGTGGATTAATTGTGGTGGC........................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................TTCTTCAGGGTCTGTCcc....................................................................................................................................................................................................... | 18 | cc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................TAGCATGCTTAGCACTGGCTAATTTGCCC.............................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGAACATGAGCTCCTGCGTGATAAGCTG..................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................................................TTCTTCAGGGTCTGTCGGCCATCTTT............................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TGCTGTTTGGTTGGTTTGGGTTTTT......................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGTGCTGAAGCTGCACTGTGTTTC......................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTCTGTAGGTTCAGTGTGGAT..................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TCCTGGTGCAGTCTTTAACCGGCCCATC...................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCCTCCCCTCCTGGGCTACTGCTG................................................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TGATGCCCACTACAGTTTTCAGGTC................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTCAGTGTGGATT.................................... | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ......................................................................................................................TGCTTACTGCTGTTCAG............................................................................................................................................................................................................................................................................................................................... | 17 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| TTGTGGCGTACATGGGTGCCGTAAACCATGATGCCCACTACAGTTTTCAGGTCAGAACATGAGCTCCTGCGTGATAAGCTGGTTGTGGTGGTTTGGGTTTTACTCGTACTTAAAGCACTGCTTACTGCTGTTCAGCGTTCTCTAACTACAGCGCACTCTCCTCCCCTCCTGGGCTACTGCTGCTGTTTGGTTGGTTTGGGTTTTTGCCTTGCTTTGCTGCTTCGTGAGCACGGTCCATTCTTCAGGGTCTGTCGGCCATCTTTGTGCTCTCCTGTGTCCTGGTGCAGTCTTTAACCGGCCCATCTTAGCAGTGGGTTTGGAGATACTCCTATAGCATGCTTAGCACTGGCTAATTTGCCCTGGCACGAGAGGAAGTGCTGAAGCTGCACTGTGTTTCTCTGTAGGTTCAGTGTGGATTAATTGTGGTGGCCTATAAGGATGGGTCCCCTGCGCA ...................................................................................................................................................................................................................................................................................................................((((((.(((.((((...))))...)))..((((((((((..((....(((....)))....))..)))))))).))..)))))).............................................................. ................................................................................................................................................................................................................................................................................................................305................................................................................................404................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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