| Gene: svct2 | ID: uc008mmh.1_intron_6_0_chr2_131897130_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(15) TESTES |
| AAAGCTCTCAGTACAGTTCCACTGAAGCAGCTCTCCACGGTAGTGACGACGGCGGGCTTGGGGTGCTGGCTCCACAGGAGGAAGGGATATTTTACCCAACGAAGATTTTGCCCTTGACCACTCCAGATAATCCTGGCTATCCTCGTGTCCTGGCTGCTGTGCTTCATCTTCACGGTGACTGATGTCTTCCCTTCCAACAGCACCGACTATGGCTACTATGCACGCACAGATGCCAGGAAGGGTGTACTTC ......................................................................................................................................((......(((((....(((......))).......))))).(((....))).......))....................................................... ......................................................................................................................................135..............................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ...........................................................................................................................................TCCTCGTGTCCTGGCTGCTGTGCTTC..................................................................................... | 26 | 1 | 6.00 | 6.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TTCATCTTCACGGTGACTGATGTCTTC............................................................. | 27 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGCACGCACAGATGCCAGGAAGGGTG...... | 26 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................TCCAACAGCACCGACTATGGCTACTATG.............................. | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................TGCTGTGCTTCATCTTCACGGTGACT...................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................TCTTCACGGTGACTGATGTCTTCCCTT......................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGCACGCACAGATGCCAGGAAGGGTGT..... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TACTATGCACGCACAGATGCCAGGAAG.......... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................TCCTCGTGTCCTGGCTGCTGTGCTTCA.................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................ATCCTCGTGTCCTGGCTGCTGTGCTTC..................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GGCTATCCTCGTGTCCTGGCTGCTGaa......................................................................................... | 27 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGCTGTGCTTCATCTTCACGGTGcct...................................................................... | 26 | cct | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................ATCCTCGTGTCCTGGCTGCT............................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................................................................................................TATGCACGCACAGATGCCAGGAAGGG........ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................TGACTGATGTCTTCCCTTCCAACAGCAC............................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................TCGTGTCCTGGCTGCTGTGCTTCATC.................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................CTATGCACGCACAGATGCCAGGAgg.......... | 25 | gg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TAATCCTGGCTATCCTCGTGTCCTGG................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................ACCGACTATGGCTACTATG.............................. | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................CATCTTCACGGTGACTGATGTCTTCC............................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TATCCTCGTGTCCTGGCTGCTGTGCTT...................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGACTGATGTCTTCCCTTCCAACAGCA................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................CTGCTGTGCTTCATCTTCACGGTGACT...................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................CAGCACCGACTATGGCTACTATGCA............................ | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TAATCCTGGCTATCCTCGTGTCCTGGCT............................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TACTATGCACGCACAGATGCCAGG............. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGCACGCACAGATGCCAGGAAGGGT....... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................CTTCATCTTCACGGTGACTGATGTCTTC............................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................CGTGTCCTGGCTGCTGTGCTTCATC.................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................CTGGCTATCCTCGTGTCCTGGCTGC............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................GATTTTGCCCTTGACCACTCCAG............................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................CTTCCAACAGCACCGACTATGGC..................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TATGCACGCACAGATGCCAGGAAGGGT....... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGCACGCACAGATGCCAGGAAGGGTGTA.... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| AAAGCTCTCAGTACAGTTCCACTGAAGCAGCTCTCCACGGTAGTGACGACGGCGGGCTTGGGGTGCTGGCTCCACAGGAGGAAGGGATATTTTACCCAACGAAGATTTTGCCCTTGACCACTCCAGATAATCCTGGCTATCCTCGTGTCCTGGCTGCTGTGCTTCATCTTCACGGTGACTGATGTCTTCCCTTCCAACAGCACCGACTATGGCTACTATGCACGCACAGATGCCAGGAAGGGTGTACTTC ......................................................................................................................................((......(((((....(((......))).......))))).(((....))).......))....................................................... ......................................................................................................................................135..............................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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