| Gene: Tmc2 | ID: uc008mik.1_intron_0_0_chr2_130021131_f.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(5) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| TCATTATCAGGAGATGAGTCCACAGTTCCTACCCCTCTAGGGCCCTCATGTATAAGTGATGTCTGAAATGTGAGGCCACACTGTCCTTGGCAGGGAAACCCGAGCGGAGGAGTGTCTGGATAGATTGACGTGCTGCAAACTCATTGCTTTCTCCCCATCTCTCTCCCCAACAAAACCTACCTCTACCTTCAACCTCAGAGGCCCCTAGTTGCCGTCAGGTTCCAGGAAGAGGCCAGTGACCATGACAGCA ......................................................(((((.((.((..((((.((.(((.((..(((((.((.((....))...)).)))))..)).))).....)).))))....)).)))))))......................................................................................................... ..................................................51.............................................................................................146...................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................TAGTTGCCGTCAGGTTCCAGGAAGA.................... | 25 | 1 | 5.00 | 5.00 | - | - | - | - | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................TGTATAAGTGATGTCTGAAATGTGAGGC.............................................................................................................................................................................. | 28 | 1 | 5.00 | 5.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TCCAGGAAGAGGCCAGTGACCATGAC.... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................TGTATAAGTGATGTCTGAAATGTGAGG............................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................TAAGTGATGTCTGAAATGTGAGGCC............................................................................................................................................................................. | 25 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCTGGATAGATTGACGTGCTGCAAACTC............................................................................................................ | 28 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ..................................................TATAAGTGATGTCTGAAATGTGAGGC.............................................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TTGGCAGGGAAACCCGAGCGGAGGAG.......................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGTATAAGTGATGTCTGAAATGTGAG................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TCAGGAGATGAGTCCACAGTTCCTAC.......................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....TATCAGGAGATGAGTCCACAGTTCCTA........................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TAGATTGACGTGCTGCAAACTCATTG........................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................CTGTCCTTGGCAGGGAAACCCGAGCGGA.............................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TGTGAGGCCACACTGTCCTTGGCAGGGtt......................................................................................................................................................... | 29 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGTATAAGTGATGTCTGAAATGTGg................................................................................................................................................................................. | 25 | g | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TGGATAGATTGACGTGCTGCAAACTCATT......................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCTGGATAGATTGACGTGCTGCAAACT............................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TAAGTGATGTCTGAAATGTGAGtc.............................................................................................................................................................................. | 24 | tc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TGACGTGCTGCAAACTCATTGCTTTCTC................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TCAGGAGATGAGTCCACAGTTCCT............................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGAAATGTGAGGCCACACTGTCCTTG................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TAGTTGCCGTCAGGTTCCAGGAAGAGGC................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGTATAAGTGATGTCTGAAATGTGAtgc.............................................................................................................................................................................. | 28 | tgc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TGGATAGATTGACGTGCTGCAAACTC............................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................ATAGATTGACGTGCTGCAAACTCATT......................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGTCCTTGGCAGGGAAACCCGAGCG................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TGAGGCCACACTGTCCTTGGCAGGGAAAC....................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGTATAAGTGATGTCTGAAATGag.................................................................................................................................................................................. | 24 | ag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................TAGGGCCCTCATGTATAAGTGATGTC........................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......TCAGGAGATGAGTCCACAGTTCCTACCa........................................................................................................................................................................................................................ | 28 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TACCTTCAACCTCAGAGGCCCCTAGTTG....................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TAGTTGCCGTCAGGTTCCAGGAAcag................... | 26 | cag | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TCAGGAGATGAGTCCACAGTTCCTACCC........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TGGATAGATTGACGTGCTGCAAACTCA........................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TGTCTGAAATGTGActag............................................................................................................................................................................. | 18 | ctag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................TAAGTGATGTCTGAAATGTGAGGC.............................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCTGGATAGATTGACGTGCTGCAAAC.............................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TTGGCAGGGAAACCCGAGCGGAGGAGT......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TAAGTGATGTCTGAAATGTGAGG............................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TAAGTGATGTCTGAAATGTGAGGCCA............................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TACCTTCAACCTCAGAGGCCCCTAGT......................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...TTATCAGGAGATGAGTCCACAGTTCCc............................................................................................................................................................................................................................ | 27 | c | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................GATAGATTGACGTGCTGCAAACTCATT......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| TCATTATCAGGAGATGAGTCCACAGTTCCTACCCCTCTAGGGCCCTCATGTATAAGTGATGTCTGAAATGTGAGGCCACACTGTCCTTGGCAGGGAAACCCGAGCGGAGGAGTGTCTGGATAGATTGACGTGCTGCAAACTCATTGCTTTCTCCCCATCTCTCTCCCCAACAAAACCTACCTCTACCTTCAACCTCAGAGGCCCCTAGTTGCCGTCAGGTTCCAGGAAGAGGCCAGTGACCATGACAGCA ......................................................(((((.((.((..((((.((.(((.((..(((((.((.((....))...)).)))))..)).))).....)).))))....)).)))))))......................................................................................................... ..................................................51.............................................................................................146...................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................GCCCCTAGTTGCCGTCAGGTTCCAGGAA...................... | 28 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ............GATGAGTCCACAGTTCCTACCCCTCTA................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| .................................................................AAATGTGAGGCCACACTGTCCTTGGCA.............................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GCCCCTAGTTGCCGTCAGGTTCCAGGA....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................GTGAGGCCACACTGTCCTTGGCActtt.............................................................................................................................................................. | 27 | cttt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |