(5)
OTHER.mut
(6)
PIWI.ip
(1)
PIWI.mut
(28)
TESTES

Sense strand
CGCAGCTCATCTGTGAGCGGATTTCTTATCCAGACTTAGAGGAAGTGCAGGTGAGTACTGGAAACTGAGCGGAGAATGCCTGGTGTGTGTGTCCAGTGGAGGAGGGGCGGCTCAGCTGATGAGCTGTGGGGCTAGTGACTGGTAGTCTTCAAGCAAGGTTAGGTGTTTAGTTTGAGACTTGATTGGCTTTCCTCAGAATGGGTCCGTGCAGTGTGCAGAGGCTCTGACTGCCGCTCCTTTCCCTTCCTCCTAATAATGTCTTTCAGACCCTGGATGACACCGAGAGAGGCTCAGGAGGCTTCGGCTCCACCGGGAA
.......................................................(((((((.(((..(((.....)))..))).......))))))).......(((......))).......................................................................................................................................................................................................
..................................................51...................................................................120..................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
............................TCCAGACTTAGAGGAAGTGCAGaccc...................................................................................................................................................................................................................................................................... 26 accc 12.00 0.00 2.00 5.00 - 2.00 2.00 - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................................................GTGAGTACTGGAAACTGAGCGGAGA................................................................................................................................................................................................................................................. 25 1 11.00 11.00 - 1.00 - 1.00 - 1.00 3.00 1.00 1.00 2.00 - - - - - - - - - - - - - - - - 1.00 -
..................................................GTGAGTACTGGAAACTGAGCGGAGAA................................................................................................................................................................................................................................................ 26 1 10.00 10.00 3.00 2.00 - 3.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................TGGATGACACCGAGAGAGGCTCAGGAG................... 27 1 8.00 8.00 3.00 1.00 - - 1.00 - 1.00 - - - - - 1.00 - - - - - 1.00 - - - - - - - - -
......................................................GTACTGGAAACTGAGCGGAG.................................................................................................................................................................................................................................................. 20 1 7.00 7.00 - - 7.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.......................TCTTATCCAGACTTAGAGGAAGTGCA........................................................................................................................................................................................................................................................................... 26 1 7.00 7.00 1.00 1.00 - 1.00 1.00 - - 1.00 - - 2.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................CCTAATAATGTCTTTCAG.................................................. 18 1 5.00 5.00 - - 5.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..........................TATCCAGACTTAGAGGAAGTGCAGacc....................................................................................................................................................................................................................................................................... 27 acc 5.00 0.00 - - 5.00 - - - - - - - - - - - - - - - - - - - - - - - - -
......................TTCTTATCCAGACTTAGAGGAAGTGCA........................................................................................................................................................................................................................................................................... 27 1 5.00 5.00 2.00 2.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTACTGGAAACTGAGCGGAGAA................................................................................................................................................................................................................................................ 25 1 4.00 4.00 1.00 1.00 - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................TCCAGTGGAGGAGGGGCGGCTCAGa........................................................................................................................................................................................................ 25 a 3.00 0.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................TGACACCGAGAGAGGCTCAGGAGGCTT............... 27 1 2.00 2.00 - - - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................TGGATGACACCGAGAGAGGCTCAGGAt................... 27 t 2.00 2.00 - 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................TGACACCGAGAGAGGCTCAGGAGG.................. 24 1 2.00 2.00 - - - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................TGACACCGAGAGAGGCTCAGGAGGCTa............... 27 a 2.00 0.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGTACTGGAAACTGAGCGGAGAAT............................................................................................................................................................................................................................................... 27 1 2.00 2.00 - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................TGAGCTGTGGGGCTAGTGACTGGTA............................................................................................................................................................................ 25 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
................................................................................................................................................GTCTTCAAGCAAGGTTAGGTGTTTAGTTTGAG............................................................................................................................................ 32 1 2.00 2.00 - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - -
...................................................TGAGTACTGGAAACTGAGCGGAGAATG.............................................................................................................................................................................................................................................. 27 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................AGTACTGGAAACTGAGCGGAGAATGCCT........................................................................................................................................................................................................................................... 28 1 2.00 2.00 - - - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................TGGATGACACCGAGAGAGGCTCAGGA.................... 26 1 2.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................TCTTATCCAGACTTAGAGGAAGTGCAG.......................................................................................................................................................................................................................................................................... 27 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00
..................................................GTGAGTACTGGAAACTGAGa...................................................................................................................................................................................................................................................... 20 a 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................................GTGACTGGTAGTCTTCAAGCAAGGTTA........................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................TGGATGACACCGAGAGAGGCTCAGGAGG.................. 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................CCTGGATGACACCGAGAGAGGCTCAt...................... 26 t 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
............................TCCAGACTTAGAGGAAGTGCAGatcc...................................................................................................................................................................................................................................................................... 26 atcc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................TCCAGACTTAGAGGAAGTGCAGacc....................................................................................................................................................................................................................................................................... 25 acc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...................................................................................................................CTGATGAGCTGTGGGtagc...................................................................................................................................................................................... 19 tagc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.......................................................................................................................TGAGCTGTGGGGCTAGTGACTGatc............................................................................................................................................................................ 25 atc 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................GTGAGTACTGGAAACTGAGCGGAG.................................................................................................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................TACTGGAAACTGAGCGGAGAATGCCT........................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....................TTTCTTATCCAGACTTAGAGGAAGT.............................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
......................TTCTTATCCAGACTTAGAGGAAGggc............................................................................................................................................................................................................................................................................ 26 ggc 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................................................GTGAGTACTGGAAACTGAGCGGAGAATGCCT........................................................................................................................................................................................................................................... 31 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................TAGTGACTGGTAGTCTTCAAGCAAGG.............................................................................................................................................................. 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................GAGTACTGGAAACTGAGCGGAGAATGC............................................................................................................................................................................................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........TCTGTGAGCGGATTTCTTATCCAGAa......................................................................................................................................................................................................................................................................................... 26 a 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
......TCATCTGTGAGCGGATTTCTTATCCAGA.......................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.......................................................TACTGGAAACTGAGCGGAGAATGCCTG.......................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTACTGGAAACTGAGCGGAGAATGCC............................................................................................................................................................................................................................................ 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................CAGACTTAGAGGAAGTGCAGaccc...................................................................................................................................................................................................................................................................... 24 accc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................CGTGCAGTGTGCAGAGGCTCTGA......................................................................................... 23 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTACTGGAAACTGAGCGGAGAAT............................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.........................TTATCCAGACTTAGAGGAAGTGCAGacc....................................................................................................................................................................................................................................................................... 28 acc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
.......................................................................................................................................TGACTGGTAGTCTTCAAGCAAGGTTAGt......................................................................................................................................................... 28 t 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................TGACTGGTAGTCTTCAAGCA................................................................................................................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
.................................................................................................................................................................................................................AGTGTGCAGAGGCTCTGACT....................................................................................... 20 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................TGGGGCTAGTGACTGGTA............................................................................................................................................................................ 18 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................TAGGTGTTTAGTTTGAGACTTGATTG................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.................................................................................................................................................................................................................AGTGTGCAGAGGCTCTGACTGCggc.................................................................................. 25 ggc 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................TGACACCGAGAGAGGCTCAGGA.................... 22 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTACTGGAAACTGAGCGGAGAATGC............................................................................................................................................................................................................................................. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........TGTGAGCGGATTTCTTATCCAGACTTAGAGt.................................................................................................................................................................................................................................................................................. 31 t 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.............................CCAGACTTAGAGGAAGTGCAG.......................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................TAGTGACTGGTAGTCTTCAAGCAAGGTTA........................................................................................................................................................... 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................GGGCTAGTGACTGGagtg.......................................................................................................................................................................... 18 agtg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
........................CTTATCCAGACTTAGAGGAAGTGC............................................................................................................................................................................................................................................................................ 24 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................TGAGACTTGATTGGCTTTCCTCAGAAT..................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............TGAGCGGATTTCTTATCCAGACTTAGA.................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -

Antisense strand
CGCAGCTCATCTGTGAGCGGATTTCTTATCCAGACTTAGAGGAAGTGCAGGTGAGTACTGGAAACTGAGCGGAGAATGCCTGGTGTGTGTGTCCAGTGGAGGAGGGGCGGCTCAGCTGATGAGCTGTGGGGCTAGTGACTGGTAGTCTTCAAGCAAGGTTAGGTGTTTAGTTTGAGACTTGATTGGCTTTCCTCAGAATGGGTCCGTGCAGTGTGCAGAGGCTCTGACTGCCGCTCCTTTCCCTTCCTCCTAATAATGTCTTTCAGACCCTGGATGACACCGAGAGAGGCTCAGGAGGCTTCGGCTCCACCGGGAA
.......................................................(((((((.(((..(((.....)))..))).......))))))).......(((......))).......................................................................................................................................................................................................
..................................................51...................................................................120..................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
mjTestesWT1()
Testes Data. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT2()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
..........................................................................................................................................TAGTCTTCAAGCAAacta................................................................................................................................................................ 18 acta 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -