| Gene: 53BP1 | ID: uc008lyf.1_intron_4_0_chr2_121053899_r | SPECIES: mm9 |
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(2) OTHER.mut |
(4) PIWI.ip |
(3) PIWI.mut |
(14) TESTES |
| TCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACATAGTACTCCTATTGGTGAGTGATTAAAAACAAAGATATTTAAGGCATTAAAATAAAAGCTACCTAAAGCCCTTCTAAGATACCATTCTTCATGCAAGTGGAACTTTTCTGTCTGAGGAGTTGGCCTGACTGAGAGGGCTGATGTTTGGTGTGGAGCAGCAGGGTTTGACCTCACTGCCAAGAGATGAGAGGAGTTGAGATGATGGAGAGAGAAGGTGGAGGGAAGGAGGGAAGAGCGTCAAGTCTGTCTTATCACTGGTTGAACTGGAACTATGCTGAGATATGCAACTGTTTTGCAAGAAGAGACAAGGAGTATGGAGAAGTGCTGTGCTCAGTGTGCTTGCCTGATCAGGCTGCAGCTGCATAGGGCAAGAAAACTTAGGTCCTCCGTCCTTGGAGCAGCGGGTGGATGTCTACATTAACCTATTTGTTTTCTCTAGTCAGTGCTGGGAGGTAACAGTCATGCCGCCTGGAGTCTCCTGTTTTCGTA ..............................................................................................................................................................................................................(((..(((.((.((((((((((.((((........................................)))).))).))))))).))))))))...........(((....(((((..(((((((.......))))).))..)))))....)))...................................................................................................................................................................... .............................................................................................................................................................................................................206......................................................................................................................................................359.................................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ...............................................................................................................................................................................................................................................................................................TCACTGGTTGAACTGGAACTATGCTGA................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TGCAAGAAGAGACAAGGAGTATGGAG.......................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TGCAAGAAGAGACAAGGAGTATGGAGAA........................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCCAAGAGATGAGAGGAGTTGAGAT................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAGCAGCGGGTGGATGTCTACAT....................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGATTAAAAACAAAGATATTTAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 30 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGATGTTTGGTGTGGAGCAGCAGGGT..................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................TTGAACTGGAACTATGCTGAGATATGC............................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................ACTGAGAGGGCTGATGTTTGGTG................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................AAATTGGAGCCCAAGAGACATAGTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGGAGCCCAAGAGACATAGTACTCCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................................GATGATGGAGAGAGAAGGTGGAGGGAA......................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................TATCACTGGTTGAACTGGAACTATGCT..................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................TGATGTTTGGTGTGGAGCAGCAagg...................................................................................................................................................................................................................................................................................................................................... | 25 | agg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGATGTTTGGTGTGGAGCAGCAGG....................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................TGAGATGATGGAGAGAGAAGGTGG............................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGTTTGGTGTGGAGCAGCAGGGTT.................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................TGTTTGGTGTGGAGCAGCAGGGTTTG.................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTGAGTGATTAAAAACAAAGATATTTAAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................GAGATATGCAACTGTgg.................................................................................................................................................................................................... | 17 | gg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TGAGAGGGCTGATGTTTGGTGTGGAa.............................................................................................................................................................................................................................................................................................................................................. | 26 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................TGCAAGAAGAGACAAGGAGTATGGAGA......................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TGTGGAGCAGCAGGGTTTGACCTCACT.......................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................................................................................TGAGAGGAGTTGAGATGATGGAGAG........................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTGCATAGGGCAAGAAAACTTAGGTC......................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................TTTGCAAGAAGAGACAAGGAGTATGG............................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| TCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACATAGTACTCCTATTGGTGAGTGATTAAAAACAAAGATATTTAAGGCATTAAAATAAAAGCTACCTAAAGCCCTTCTAAGATACCATTCTTCATGCAAGTGGAACTTTTCTGTCTGAGGAGTTGGCCTGACTGAGAGGGCTGATGTTTGGTGTGGAGCAGCAGGGTTTGACCTCACTGCCAAGAGATGAGAGGAGTTGAGATGATGGAGAGAGAAGGTGGAGGGAAGGAGGGAAGAGCGTCAAGTCTGTCTTATCACTGGTTGAACTGGAACTATGCTGAGATATGCAACTGTTTTGCAAGAAGAGACAAGGAGTATGGAGAAGTGCTGTGCTCAGTGTGCTTGCCTGATCAGGCTGCAGCTGCATAGGGCAAGAAAACTTAGGTCCTCCGTCCTTGGAGCAGCGGGTGGATGTCTACATTAACCTATTTGTTTTCTCTAGTCAGTGCTGGGAGGTAACAGTCATGCCGCCTGGAGTCTCCTGTTTTCGTA ..............................................................................................................................................................................................................(((..(((.((.((((((((((.((((........................................)))).))).))))))).))))))))...........(((....(((((..(((((((.......))))).))..)))))....)))...................................................................................................................................................................... .............................................................................................................................................................................................................206......................................................................................................................................................359.................................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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