| Gene: Trp53bp1 | ID: uc008lyd.1_intron_23_0_chr2_121082417_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(8) TESTES |
| GGAAGGGGTGGGAGCAAACGCTCCCGGTGCTGACTCCCTTGCTGCTGAAGGTAGCCTGTGCCCTTTCAGAATAAGAGTCTTCTCGTGCCCCTTTACTATGAACACACAGGGAGCTCGACTGCTTCACCATGTCATAGATTTCCTACGATTAAGCTGAGAATCACAAGTAATTTAAGATGTCTCAATTAATTTGATAACTGAATTTTCTTTGCTAAGCGGCCTTCCAAAGTTATGACCGAATACTCCAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................AACACACAGGGAGCTCGACTGCTTCACCATGTCATAGATTTCCTACGATTAA.................................................................................................. | 52 | 1 | 118.00 | 118.00 | 118.00 | - | - | - | - | - | - | - |
| .............................................................................................TACTATGAACACACAGGGAGCTCGACTG................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - |
| .........................................................................................................................CTTCACCATGTCATAGtgga............................................................................................................. | 20 | tgga | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................TTTACTATGAACACACAGGGAGCTCGACT.................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................TTACTATGAACACACAGGGAGCTCGAC................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| ..................................................GTAGCCTGTGCCCTTTCAGAATAAGAGTC........................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................TTCACCATGTCATAGcggc............................................................................................................. | 19 | cggc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - |
| GGAAGGGGTGGGAGCAAACGCTCCCGGTGCTGACTCCCTTGCTGCTGAAGGTAGCCTGTGCCCTTTCAGAATAAGAGTCTTCTCGTGCCCCTTTACTATGAACACACAGGGAGCTCGACTGCTTCACCATGTCATAGATTTCCTACGATTAAGCTGAGAATCACAAGTAATTTAAGATGTCTCAATTAATTTGATAACTGAATTTTCTTTGCTAAGCGGCCTTCCAAAGTTATGACCGAATACTCCAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................AGTCTTCTCGTGCCtagc................................................................................................................................................................. | 18 | tagc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - |
| .......................................................................GAGTCTTCTCGTGCCagt................................................................................................................................................................. | 18 | agt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - |