| Gene: Cdan1 | ID: uc008lwu.1_intron_11_0_chr2_120550463_r | SPECIES: mm9 |
|
|
(1) OTHER.mut |
(4) PIWI.ip |
(11) TESTES |
| GTCAGGTAGATGCCTTTGAGGTGACTACAACTGCTTCAGAGCATGGTTTGGTGAGTGTCACACCAGATAAATGAGCTGAATAGATAAGGACCCAGCAAGAGACCAGCTAGGGAAGACTTAAGACGGTCCATCTTCTAGACTTCTATTTCTGCACATTCGGGAGGGAAGGGAGACTGCCTGCCTTCCCCATCCAGCATTGGTCTGTTCTCCCCCAGGACAGTGTACCTGTTGTGGACCAGCAGCTGTTATATACCTGTTGCCCCTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................ACCAGCTAGGGAAGACTTAAGACGGTCCATCTTCTAGACTTCTATTTCTGCA................................................................................................................ | 52 | 1 | 17.00 | 17.00 | 17.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................TGCTTCAGAGCATGGTTTGGacag.................................................................................................................................................................................................................. | 24 | acag | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................CTGAATAGATAAGGACCCAGC......................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........GATGCCTTTGAGGTctac............................................................................................................................................................................................................................................... | 18 | ctac | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................TACAACTGCTTCAGAGCATGGTTTGGa..................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................AACTGCTTCAGAGCATGGTT......................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................TAGATAAGGACCCAGCAAGAGACCAGCTA............................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................................................................................................................GTGGACCAGCAGCTGTT.................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................GAATAGATAAGGACCCAGCAAGAGA................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................................................................TGTTGTGGACCAGCAGC...................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 |
| GTCAGGTAGATGCCTTTGAGGTGACTACAACTGCTTCAGAGCATGGTTTGGTGAGTGTCACACCAGATAAATGAGCTGAATAGATAAGGACCCAGCAAGAGACCAGCTAGGGAAGACTTAAGACGGTCCATCTTCTAGACTTCTATTTCTGCACATTCGGGAGGGAAGGGAGACTGCCTGCCTTCCCCATCCAGCATTGGTCTGTTCTCCCCCAGGACAGTGTACCTGTTGTGGACCAGCAGCTGTTATATACCTGTTGCCCCTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........ATGCCTTTGAGGTGACTACAACTGCTTCA................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................TGAGGTGACTACAACTGCTTCAGAGCA.............................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................CGGTCCATCTTCTAGACTTC.......................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |