| Gene: Lrrc57 | ID: uc008lwm.1_intron_4_0_chr2_120434760_r | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(12) TESTES |
| ATGTCACAGGGCGTTCCTGCCCGGGCGGAAGCCCTGGGAGCGCGTCTCAGGCGAGCGCGGGTCCCCGGTGTTCCCTGGCGGAGTCTTCTTTGCACTGAGCGGTAGGAGGCGAGTCTCAAGCTCCCTGTTCCGGCAGCAGCTATCGGAGGCTCCCTGGCCCTTAGCTCTGCTGCCAAAGCATCAGGACCTTGTGGTAGCGCTGCCTGCTCGCCTGTTTTCTCCTTGCCACTCTTGGGCTGGCCCCAGGGAAGTAGGGATAGGCAGAAGGTGACAATTGGGACAGGAGACCCAAACGGGAGATTTAGCGACGACTGTATGTCTAGACTAGGCGGTGACAGCTATGCTTCTTTTCCTGCAGGGAACTGAGCCGTGGCGCTAGGATGGGTAACAGTGCTCTCCGTGCTCATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................CTCAAGCTCCCTGTTCCGGC.................................................................................................................................................................................................................................................................................. | 20 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................GTCTCAAGCTCCCTGTTCCGGC.................................................................................................................................................................................................................................................................................. | 22 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................GGCGGAGTCTTCTTTGCACTGAGCGGTA................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................AGGCTCCCTGGCCCTTAGCTCTGCTGCCAAAGC..................................................................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GCGCGGGTCCCCtcc................................................................................................................................................................................................................................................................................................................................................... | 15 | tcc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................ACTGAGCGGTAGGAGGCGAGTCTC................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GCACTGAGCGGTAGGAGGCGA........................................................................................................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................GCTCCCTGTTCCGGCgcca.............................................................................................................................................................................................................................................................................. | 19 | gcca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................TTGCACTGAGCGGTAGGAGGCGAG....................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................CACTGAGCGGTAGGAGGCGAGT...................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................AGGTGACAATTGGGACAGGAGAC........................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................AGCGGTAGGAGGCGAGTCTCAAGCT.............................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................GTAGGAGGCGAGTCTCAA................................................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................GGGTCCCCGGTGTTCtgca........................................................................................................................................................................................................................................................................................................................................... | 19 | tgca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................................................CAAAGCATCAGGACCTTGTGGTAGCGCT............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................CTGCTGCCAAAGCATCAGGACCTTGTGG...................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................ACTGAGCGGTAGGAGGCGA........................................................................................................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................CTGAGCGGTAGGAGGCGA........................................................................................................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................GAGCGCGTCTCAGGCGAG................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................GCGCGGGTCCCCtccc.................................................................................................................................................................................................................................................................................................................................................. | 16 | tccc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................ACTGAGCGGTAGGAGGCG......................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................AGCGGTAGGAGGCGAGTCTCAAG................................................................................................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TGAGCGGTAGGAGGCGAGTCTC................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ATGTCACAGGGCGTTCCTGCCCGGGCGGAAGCCCTGGGAGCGCGTCTCAGGCGAGCGCGGGTCCCCGGTGTTCCCTGGCGGAGTCTTCTTTGCACTGAGCGGTAGGAGGCGAGTCTCAAGCTCCCTGTTCCGGCAGCAGCTATCGGAGGCTCCCTGGCCCTTAGCTCTGCTGCCAAAGCATCAGGACCTTGTGGTAGCGCTGCCTGCTCGCCTGTTTTCTCCTTGCCACTCTTGGGCTGGCCCCAGGGAAGTAGGGATAGGCAGAAGGTGACAATTGGGACAGGAGACCCAAACGGGAGATTTAGCGACGACTGTATGTCTAGACTAGGCGGTGACAGCTATGCTTCTTTTCCTGCAGGGAACTGAGCCGTGGCGCTAGGATGGGTAACAGTGCTCTCCGTGCTCATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM475281(GSM475281) total RNA. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................CTTAGCTCTGCTGCCAAAGCA.................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................CAAGCTCCCTGTTCCG.................................................................................................................................................................................................................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |