| Gene: Mapkbp1 | ID: uc008luw.1_intron_5_0_chr2_119838467_f | SPECIES: mm9 |
|
|
(3) OTHER.mut |
(2) PIWI.ip |
(12) TESTES |
| GCAACCGGCACATCAAATTCTGGTACCTGGATGACAGTAAGACCTCAAAGGTGAGGGCTGAGATGACCAACCCTGAACAGCACTCCAGCTGTTGCCTTTGGCTTGTTTAACAGTCACAGGTTCTTCATGGACCTGACCTGCCTGGGCTGAGGCGTCTCAAAGAACACATGCTTGCCCTCTCTCTGAGGCCCTCATTTCCAAGGCTAGATGGCTGTAGTGGTGTCTCCACAGGTGAACGCCACTGTGCCCCTGCTGGGCCGCTCGGGGCTGCTGGGGGAGCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGGGCTGAGATGACCAACCCTGAACAGCACTCCAGCTGTTGCCTTTGGC................................................................................................................................................................................... | 52 | 1 | 216.00 | 216.00 | 216.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............TCAAATTCTGGTACCTGGATGACAGTAt................................................................................................................................................................................................................................................. | 28 | t | 3.00 | 0.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - |
| ..............AAATTCTGGTACCTGGATGACAGTA.................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........ACATCAAATTCTGGTACCTGGATGACAGTA.................................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................TGGTACCTGGATGACAGTAAGACC............................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGGGCTGAGATGACCAAC.................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................TGGATGACAGTAAGACCTCAAAG....................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................CGCTCGGGGCTacca........ | 15 | acca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........ACATCAAATTCTGGTACCTGGATGA....................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................TTGTTTAACAGTCACAGGTTCTTCAT......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........ACATCAAATTCTGGTACCTGGATGAC...................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .............CAAATTCTGGTACCTGGATGACAGTA.................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| GCAACCGGCACATCAAATTCTGGTACCTGGATGACAGTAAGACCTCAAAGGTGAGGGCTGAGATGACCAACCCTGAACAGCACTCCAGCTGTTGCCTTTGGCTTGTTTAACAGTCACAGGTTCTTCATGGACCTGACCTGCCTGGGCTGAGGCGTCTCAAAGAACACATGCTTGCCCTCTCTCTGAGGCCCTCATTTCCAAGGCTAGATGGCTGTAGTGGTGTCTCCACAGGTGAACGCCACTGTGCCCCTGCTGGGCCGCTCGGGGCTGCTGGGGGAGCT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................GTGGTGTCTCCACAcaga................................................... | 18 | caga | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .CGGCACATCAAATcttc....................................................................................................................................................................................................................................................................... | 17 | cttc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |