| Gene: Zfyve19 | ID: uc008lti.1_intron_4_0_chr2_119037280_f | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| GGCTTGCAGCCTTGCAGGGCAGAGTCCCACCTTCTCACACCGTGAGACCGGTGAGTGTGTGGCTTAGAAGAAAAGGATTTCCTAGGGTGAGCACCCTTCACAAGCCCAGATACATGTATGATCCTGTGCTTTGCAGGGATTGGTAAAGCCTCCCACCCCTACCTCCTGAGCCTTAAGCCTGCTCCTAAGCCAAAGAACAAAGGCCAAGCAGCAGGACTGAGTGCGTCAGCAGAGTGGATACTCAGTCCTGTTGGGAGCCGCCAGACCGACTCACCTATGTGGACTTGAATTCATCCCTTTCCTTGGGCTTTGAAAATTCTTCAGCATCTACCCCTGACTCAGACTTCTTCTGCACTCTTGGTGTGGCCTTCCCCACAGCCCTTTCCCCACTGAGCTGCCCTCCTCCGCACAGGCACACCAGGCACCAGATACCAGGACCCAGGCCCAGCAGACGCAGGATCT ............................................................(((((((.((...(((....))).(((((....((((.((.((((.(((((.((....))))).)).)))))).))))...((.....))...)))))....)).))))))).....((((((.((..(((..........)))..)).))))))....................................................................................................................................................................................................................................................... ..................................................51....................................................................................................................................................................217................................................................................................................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGGACCCAGGCCCAGCAGACGCAGG.... | 29 | 1 | 21.00 | 21.00 | 5.00 | 3.00 | 8.00 | - | - | - | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGGACCCAGGCCCAGCAGACGC....... | 26 | 1 | 8.00 | 8.00 | - | 1.00 | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGGACCCAGGCCCAGCAGACGCAG..... | 28 | 1 | 7.00 | 7.00 | 4.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................TAAGCCAAAGAACAAAGGCCAAGCAGCA......................................................................................................................................................................................................................................................... | 28 | 1 | 4.00 | 4.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGGACCCAGGCCCAGCAGACGCA...... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGTGGCTTAGAAGAAAAGGA................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGTGGCTTAGAAGAAAAGGAT................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACCCAGGCCCAGCAGACGCAG..... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TACCTCCTGAGCCTTAAGCCTGCTCC..................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................................................TACCTCCTGAGCCTTAAGCCTGCTCCT.................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................CTCACACCGTGAGACCGGTGAGTGTGTGGCTTAGAA......................................................................................................................................................................................................................................................................................................................................................................................................... | 36 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACCCAGGCCCAGCAGACGCAGGAT.. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................GAAGAAAAGGATTTCCTAGGGTGAGC.................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TAAGCCAAAGAACAAAGGCCAAGCAGCAG........................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGACTCAGACTTCTTCTGCACTCTcggt.................................................................................................... | 28 | cggt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACCCAGGCCCAGCAGACGCAtc.... | 28 | tc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................TGACTCAGACTTCTTCTGCACTCTTGGT.................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................AGCCAAAGAACAAAGGCCAAGCAGCAGGACT.................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGTGGCTTAGAAGAAAAGG.................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TCACAAGCCCAGATACATGTATGATCCT................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................CCTTTCCTTGGGCTTTGAAAATTCTTCActtt....................................................................................................................................... | 32 | cttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................CTTGGGCTTTGAAAATagtc............................................................................................................................................. | 20 | agtc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................TAGAAGAAAAGGATTTCCTAGGGTGAGC.................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGATACCAGGACCCAGGCCCAGCAG........... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................ACACCGTGAGACCGGTGAGTGTGTGGa............................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................TTCTGCACTCTTGGTGTGGCCTTCCC......................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................CAGCATCTACCCCTGACTCAGACTTCTTCT............................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AGGACTGAGTGCGTCAGCAGA..................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................GCCAAAGAACAAAGGCCAAGCAGCAG........................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGGACCCAGGCCCAGCAGACGCAaa.... | 29 | aa | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................AGAACAAAGGCCAAGCAGCAGGACTGA.................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAGAAGAAAAGGATTTCCTAGGGTG..................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGACCCAGGCCCAGCAGACGCAGGA... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TAAGCCAAAGAACAAAGGCCAAGCAGC.......................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TGTGTGGCTTAGAAGAAAAGGATTTCCTA.......................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................GAACAAAGGCCAAGCAGCAGGACTGA.................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGTGGCTTAGAAGAAAAGGATT............................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................TCACCTATGTGGACTTGAATTCATCCC..................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................CGTGAGACCGGTtagt...................................................................................................................................................................................................................................................................................................................................................................................................................... | 16 | tagt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCTTGCAGCCTTGCAGGGCAGAGTCCCACCTTCTCACACCGTGAGACCGGTGAGTGTGTGGCTTAGAAGAAAAGGATTTCCTAGGGTGAGCACCCTTCACAAGCCCAGATACATGTATGATCCTGTGCTTTGCAGGGATTGGTAAAGCCTCCCACCCCTACCTCCTGAGCCTTAAGCCTGCTCCTAAGCCAAAGAACAAAGGCCAAGCAGCAGGACTGAGTGCGTCAGCAGAGTGGATACTCAGTCCTGTTGGGAGCCGCCAGACCGACTCACCTATGTGGACTTGAATTCATCCCTTTCCTTGGGCTTTGAAAATTCTTCAGCATCTACCCCTGACTCAGACTTCTTCTGCACTCTTGGTGTGGCCTTCCCCACAGCCCTTTCCCCACTGAGCTGCCCTCCTCCGCACAGGCACACCAGGCACCAGATACCAGGACCCAGGCCCAGCAGACGCAGGATCT ............................................................(((((((.((...(((....))).(((((....((((.((.((((.(((((.((....))))).)).)))))).))))...((.....))...)))))....)).))))))).....((((((.((..(((..........)))..)).))))))....................................................................................................................................................................................................................................................... ..................................................51....................................................................................................................................................................217................................................................................................................................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) |
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| ........................................................................................................................................................................................................................................................................................................................AAAATTCTTCAGCAT....................................................................................................................................... | 15 | 18 | 0.06 | 0.06 | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |