| Gene: Casc5 | ID: uc008ltb.1_intron_6_0_chr2_118891738_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(11) TESTES |
| GAGGACCTGGGTTAACTCCTACATTGCAATTTGTAATCATGTGTGACTATAGTTCTAGGCAATTCTGGCCTCCACAGGCACCAGGCAGGCAAGTGGTTCATAGGCACACATGCAGGTAGAACACCCTTACACATAAAATAATAAAACAATAAATTATAAAAAATTATATTTGATCTAATATTTCTATTTTTTCATTATAGTTCTCAATTACAGACTGCAACCATGAAAGGAAACATGCAAATGATCAGAC .......................................................................................................(((....))).(((.....))).......................................((((..(((...((((....))))...))).))))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................CCACAGGCACCAGGCAGGCAAGTGGTTCATAGGCACACATGCAGGTAGAACA............................................................................................................................... | 52 | 1 | 29.00 | 29.00 | 29.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TTACAGACTGCAACCATGAAAGGAAACA............... | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGAAAGGAAACATGCAAATGATCAGAC | 27 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGAAAGGAAACATGCAAATGATCAGACat | 29 | at | 1.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TACAGACTGCAACCATGAAAGGAAACA............... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................AATTACAGACTGCAACCATGAAAGGAA.................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................TTCTCAATTACAGACTGCAACCATGAAAGG.................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................................................TTACAGACTGCAACCATGAAAGGAAACAT.............. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................CAATTACAGACTGCAACCATGAAAGGA................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................................................................TACAGACTGCAACCATGAAAGGAAACAT.............. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................CAATTACAGACTGCAACCATGAAAGGAAAC................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................TCTCAATTACAGACTGCAACCATGAAAGG.................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................ACAGACTGCAACCATGAAAGGA................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................................TACAGACTGCAACCATGAAAGGAAACATGC............ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| GAGGACCTGGGTTAACTCCTACATTGCAATTTGTAATCATGTGTGACTATAGTTCTAGGCAATTCTGGCCTCCACAGGCACCAGGCAGGCAAGTGGTTCATAGGCACACATGCAGGTAGAACACCCTTACACATAAAATAATAAAACAATAAATTATAAAAAATTATATTTGATCTAATATTTCTATTTTTTCATTATAGTTCTCAATTACAGACTGCAACCATGAAAGGAAACATGCAAATGATCAGAC .......................................................................................................(((....))).(((.....))).......................................((((..(((...((((....))))...))).))))................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........ACTCCTACATTGCAagct.............................................................................................................................................................................................................................. | 18 | agct | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................TCCACAGGCACCAGGCAG.................................................................................................................................................................. | 18 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | 0.08 |