| Gene: Bub1b | ID: uc008lse.1_intron_1_0_chr2_118426021_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| TCAGAATCTACTAGGGTCTTGAGTACTGTGCCACTGAGTTAAACCCACTCTATTCCTTTTCTGTTTAACAAATTCTCAAATTCTAGTCTAGTTACTTAAGTCACTATGAACTCATTGAGAAGTGAATAGAAATAGAAAGGAGACCTGTTTCCTGGGGCTGTCAGAACTGCATGTGCTAACACACCCTGTTTCAATTCCAGGGCATTTGAATCTGAAATCCGCTTTTACTCTGGAGATGACCCTCTGGATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................GACCTGTTTCCTGGGGCTGTCAGAACTGCATGTGCTAACACACCCTGTTTCA......................................................... | 52 | 1 | 72.00 | 72.00 | 72.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................CATTTGAATCTGAAATCCGC............................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................GGGGCTGTCAGAACTGCA............................................................................... | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGAATCTGAAATCCGCTTTTACTCTGG................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................TGAAATCCGCTTTTACTCTGGAGATGAC.......... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................ATCTGAAATCCGCTatcg....................... | 18 | atcg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................CACTGAGTTAAACCCAaga........................................................................................................................................................................................................ | 19 | aga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................GGCTGTCAGAACTGCATGTGCTAA....................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................GAGTACTGTGCCACTGAG.................................................................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ........................................................................................................................................................................................................GGCATTTGAATCTGAA.................................. | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.33 |
| TCAGAATCTACTAGGGTCTTGAGTACTGTGCCACTGAGTTAAACCCACTCTATTCCTTTTCTGTTTAACAAATTCTCAAATTCTAGTCTAGTTACTTAAGTCACTATGAACTCATTGAGAAGTGAATAGAAATAGAAAGGAGACCTGTTTCCTGGGGCTGTCAGAACTGCATGTGCTAACACACCCTGTTTCAATTCCAGGGCATTTGAATCTGAAATCCGCTTTTACTCTGGAGATGACCCTCTGGATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................TTTCAATTCCAGGGCAttt.............................................. | 19 | ttt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CTGTTTCAATTCCAatac................................................... | 18 | atac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |