| Gene: Gyltl1b | ID: uc008kxn.1_intron_12_0_chr2_92211051_r | SPECIES: mm9 |
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(6) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(22) TESTES |
| TGCAGGGCGGTCGCAGGAGGAACAGGGCCTTCCCGGAGCCACTGGAGCAGGTGAGGCCAGCTGCTGCGCACAGCAGGGCGAGTAGCCGTCGGGCCCCGCGGTCCAGTGCTCATCTTGCTATGGTCCTTGGTCCGCAGGGTCGGTGATGGAGCCCGCAGCCCGGGGTCGCGCCCCGCCCTGAGTCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................CGTCGGGCCCCGCGGacg................................................................................... | 18 | acg | 29.00 | 23.00 | 14.00 | 4.00 | 3.00 | 2.00 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................CGTCGGGCCCCGCGG...................................................................................... | 15 | 1 | 23.00 | 23.00 | 7.00 | - | 3.00 | 2.00 | - | 5.00 | 2.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CGTCGGGCCCCGCGGacgc.................................................................................. | 19 | acgc | 23.00 | 23.00 | - | 9.00 | 7.00 | 2.00 | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................CGTCGGGCCCCGCGGa..................................................................................... | 16 | a | 20.00 | 23.00 | - | 4.00 | 2.00 | 6.00 | 6.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................CCCGGAGCCACTGGAGCAGGTG...................................................................................................................................... | 22 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CGTCGGGCCCCGCGGac.................................................................................... | 17 | ac | 5.00 | 23.00 | - | - | 2.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................GTCGGGCCCCGCGGacgc.................................................................................. | 18 | acgc | 4.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| .......................................................................................GTCGGGCCCCGCGGacg................................................................................... | 17 | acg | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GCCGTCGGGCCCCGgg....................................................................................... | 16 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................GAGCCACTGGAGCAGGTGAG.................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CGTCGGGCCCCGCGGccg................................................................................... | 18 | ccg | 1.00 | 23.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................................................GGGTCGGTGATGGAGaa.................................. | 17 | aa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .GCAGGGCGGTCGCAGGAGGAACAGGGC............................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................GTCGGGCCCCGCGGac.................................................................................... | 16 | ac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................CGTCGGGCCCCGCGGatg................................................................................... | 18 | atg | 1.00 | 23.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GAGGCCAGCTGCTGCGCACAGCA................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTGAGGCCAGCTGCTGCGCACAGCAGGGCGgg......................................................................................................... | 32 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...AGGGCGGTCGCAGGAGGAACAGGGC............................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............AGGAGGAACAGGGCCTTCCCGGA...................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| TGCAGGGCGGTCGCAGGAGGAACAGGGCCTTCCCGGAGCCACTGGAGCAGGTGAGGCCAGCTGCTGCGCACAGCAGGGCGAGTAGCCGTCGGGCCCCGCGGTCCAGTGCTCATCTTGCTATGGTCCTTGGTCCGCAGGGTCGGTGATGGAGCCCGCAGCCCGGGGTCGCGCCCCGCCCTGAGTCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................CCCGCGGTCCAGTGCTCATCTTGCTA................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GGCCTTCCCGGAGCggga.................................................................................................................................................... | 18 | ggga | 4.00 | 0.00 | - | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................CCCCGCGGTCCAGTGCTCATCTTGCTA................................................................... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................CTCATCTTGCTATGGTCCTTGGTCCGCA................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................CCGCGGTCCAGTGCTCATCTTGCTA................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................CATCTTGCTATGGTCCTTGGTCCGCA................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TCCAGTGCTCATCTTGCTATGGTCCTTG.......................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TCATCTTGCTATGGTCCTTGGTCCGCA................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |