(10)
OTHER.mut
(1)
OVARY
(3)
PIWI.ip
(1)
PIWI.mut
(34)
TESTES

Sense strand
TGAAAAGCTCCATTATTGGCAAGAAGAAGCCAGCAGCCGCTAAGAAAGGGGTAGGTGGGATGAGGCAATATCCTAGGGTGGTTGTGAGCTGCAGTTGGGCTCCTTCAGTTCTTCCATGTACTGACAAAGGTCCTAGACTTACCTGAACCTTGTCTGTGAAAGTGATTTAAAGGCACTTGTCTTTGGGGTCTCCTGGGCAGTGAGCAAGACCAAGCACATCTAGTACTTAGAGCACATCTAGTACTTGGCACACAGCAGGCCCCAGTCAGCATTAACTGCTGTCCTCATTCCTGAGACCTGTGTGGCGGCGGTGCCAAGCTCATCACCAGCTCCAGCAGAACCACCGTTGTCTTAGAATGCTCACTGGATACTGAGGAGGAGACCCCCTTCATTGTGGGTGTGACCGCAGTGGCCACAGTGGGGAGGGAGCTGAGGAAACTGGCTGGCCAGATCCCACATCACATGGTTTTCTCTTCAGCTGGGTGCCAAGAAAGGCCTGGGAGCTCAGAAGGTGAGCAACCAGAGCTT


Size Perfect hit Total Norm Perfect Norm GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT1()
Testes Data. (testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR037900(GSM510436)
testes_rep1. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
...........................................................................................................................................................................................................................................ATCTAGTACTTGGCACACAGCAGGC............................................................................................................................................................................................................................................................................ 25 1 16.00 16.00 - 16.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................CTGGATACTGAGGAGGAGACCCCC............................................................................................................................................. 24 1 6.00 6.00 - 6.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGGCCTGGGAGCTCAGAAGGTG.............. 26 2 2.00 2.00 - - - - - 0.50 - - - - - - - - - 0.50 - - - - - - 0.50 - 0.50 - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGGAGCTCAGAAGG................ 18 3 1.67 1.67 - - - - - - - - - - - - - - - - 1.67 - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGGCCTGGGAGCTCAGAAGGT............... 25 2 1.50 1.50 - - - - - - - - - 1.00 - - - - - - - 0.50 - - - - - - - - - - - - - - - - -
...............TTGGCAAGAAGAAGCCAGCAGCCGCTAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 30 2 1.50 1.50 - - 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.GAAAAGCTCCATTATTGGCAAGcag...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 cag 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................AGAAGAAGCCAGCAGCCGCTAAGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 2 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
.............TATTGGCAAGAAGAAGCCttt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 21 ttt 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.....AGCTCCATTATTGGCAAGAAGAAGCCAGt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 t 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGTGCCAAGAAAGGCCTG............................. 22 2 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............TTGGCAAGAAGAAGCCAGCAGCCGCTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 2 1.00 1.00 - - - 0.50 - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - -
............TTATTGGCAAGAAGAAGCCAGCAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 2 1.00 1.00 - - - - - - - - - - - - - 0.50 - - - - - - 0.50 - - - - - - - - - - - - - -
.......CTCCATTATTGGCAAGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 2 1.00 1.00 0.50 - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - -
..AAAAGCTCCATTATTGGCAAGAAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 2 1.00 1.00 - - - - - - - - - - - - - 0.50 - 0.50 - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGGCCTGGGAGCTCAGAAGG................ 24 2 1.00 1.00 - - - - 0.50 - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - -
............TTATTGGCAAGAAGAAGCCAGCAGCCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 2 1.00 1.00 - - 0.50 - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - -
..................GCAAGAAGAAGCCAGCAGCCGCTAAGt................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 t 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........CATTATTGGCAAGAAGAAGCCAGt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 24 t 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGCCAAGAAAGGCCTGt............................ 21 t 1.00 0.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...AAAGCTCCATTATTGGCAAGAAGAAGCt................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 28 t 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.GAAAAGCTCCATTATTGGCAAGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 2 1.00 1.00 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGAAAGGCCTGGGAGCTCAGAAGGT............... 30 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................CAGCCGCTAAGAAAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 17 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGAAAGGCCTGGGAGCTCAGAAGG................ 29 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................AAGAAGCCAGCAGCCGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 2 0.50 0.50 - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGAAAGGCCTGGGAGCTCAGAAG................. 28 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...AAAGCTCCATTATTGGCAAGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGGCCTGGGAGCTCAGAAGGgg.............. 26 gg 0.50 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - -
...............TTGGCAAGAAGAAGCCAGCAGCCGCTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 2 0.50 0.50 - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......CTCCATTATTGGCAAGAAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGGCCTGGGAGCTCAGAAGGTGA............. 27 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGGCCTGGGAGCTCAGAAG................. 25 2 0.50 0.50 - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGCCAAGAAAGGCCTGGGAGC........................ 25 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............TTGGCAAGAAGAAGCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 18 2 0.50 0.50 - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - -
.GAAAAGCTCCATTATTGGCAAGAAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 29 2 0.50 0.50 - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - -
...............TTGGCAAGAAGAAGCCAGCAGCCGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......GCTCCATTATTGGCAAGAAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 23 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...AAAGCTCCATTATTGGCAAGAAGAAGCCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 31 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........TCCATTATTGGCAAGAAGAAGCCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 2 0.50 0.50 - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGGCCTGGGAGCTCAGAAG................. 23 2 0.50 0.50 - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAGGCCTGGGAGCTCAGAAG................. 24 2 0.50 0.50 - - - - - - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........CATTATTGGCAAGAAGAAGCCAGCAGCCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 30 2 0.50 0.50 - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........TCCATTATTGGCAAGAAGAAGCCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 2 0.50 0.50 - - - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
TGAAAAGCTCCATTATTGGCAAGAAGAAGCCAGCAGCCGCTAAGAAAGGGGTAGGTGGGATGAGGCAATATCCTAGGGTGGTTGTGAGCTGCAGTTGGGCTCCTTCAGTTCTTCCATGTACTGACAAAGGTCCTAGACTTACCTGAACCTTGTCTGTGAAAGTGATTTAAAGGCACTTGTCTTTGGGGTCTCCTGGGCAGTGAGCAAGACCAAGCACATCTAGTACTTAGAGCACATCTAGTACTTGGCACACAGCAGGCCCCAGTCAGCATTAACTGCTGTCCTCATTCCTGAGACCTGTGTGGCGGCGGTGCCAAGCTCATCACCAGCTCCAGCAGAACCACCGTTGTCTTAGAATGCTCACTGGATACTGAGGAGGAGACCCCCTTCATTGTGGGTGTGACCGCAGTGGCCACAGTGGGGAGGGAGCTGAGGAAACTGGCTGGCCAGATCCCACATCACATGGTTTTCTCTTCAGCTGGGTGCCAAGAAAGGCCTGGGAGCTCAGAAGGTGAGCAACCAGAGCTT


Size Perfect hit Total Norm Perfect Norm GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT1()
Testes Data. (testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesWT3()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
mjTestesWT4()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR037900(GSM510436)
testes_rep1. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
............................................................................................................................................................................................................................................................CAGCAGGCCCCAGTCAGCATTA.............................................................................................................................................................................................................................................................. 22 1 3.00 3.00 - - - - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................GCTCCTTCAGTTCTTCCATGTACTGA.................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCACATCACATtctg................................................................ 18 tctg 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................CTCCTTCAGTTCTTCCATGT......................................................................................................................................................................................................................................................................................................................................................................................................................... 20 2 0.50 0.50 - - - - - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - - - -
....................................................................................................TCCTTCAGTTCTTCCAT........................................................................................................................................................................................................................................................................................................................................................................................................................... 17 8 0.12 0.12 - - - - - - - - 0.12 - - - - - - - - - - - - - - - - - - - - - - - - - -