(2)
OTHER.mut
(7)
PIWI.ip
(1)
PIWI.mut
(1)
TDRD1.ip
(25)
TESTES

Sense strand
GCCTATGTTATAGTGGACGGTGACTCTGCTCGTCTGATCAACGGTTTGGGAACTCAGGAATCTCGCCTGCTCTTGTCGTAGTACCCAGAAGAGCAGTGGCCGAGGAATCTGAAGTTGTTGAGAACCAAGTCCCTGCCCTGTGACCTTGACCCCCAACCCTTTTTCTTTTCTTTGCCCTGGCTGACCTCGAGACACTCTAGGTAGGCCATGCTGGCCTCAAGTTCAGAGAGATCGGCTTGCTTCTGCTTGC
.............................................................(((((((((((((..............)))))))..))).)))..................................................................................................................................................
..................................................51....................................................105...............................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGCC..................................................................................................................................................... 28 1 97.00 97.00 28.00 16.00 5.00 8.00 3.00 10.00 10.00 2.00 7.00 - - 3.00 3.00 1.00 - - - 1.00 - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGC...................................................................................................................................................... 27 1 50.00 50.00 8.00 12.00 7.00 4.00 11.00 - 1.00 1.00 - - 1.00 - - 2.00 1.00 - 1.00 1.00 - - - - - - -
........................................................................TTGTCGTAGTACCCAGAAGAGCAGTGGC...................................................................................................................................................... 28 1 16.00 16.00 3.00 8.00 - 1.00 - 1.00 3.00 - - - - - - - - - - - - - - - - - -
........................................................................TTGTCGTAGTACCCAGAAGAGCAGTGGCC..................................................................................................................................................... 29 1 12.00 12.00 3.00 8.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
......................................................................TCTTGTCGTAGTACCCAGAAGAGCAG.......................................................................................................................................................... 26 1 9.00 9.00 4.00 3.00 - - - - 1.00 1.00 - - - - - - - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGG....................................................................................................................................................... 26 1 8.00 8.00 1.00 4.00 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
.....TGTTATAGTGGACGGTGACTCTGCTC........................................................................................................................................................................................................................... 26 1 6.00 6.00 1.00 - - 2.00 - - - 1.00 - 2.00 - - - - - - - - - - - - - - -
............................................................................................GCAGTGGCCGAGGAATCTGAAGTTGT.................................................................................................................................... 26 1 6.00 6.00 - - - - 6.00 - - - - - - - - - - - - - - - - - - - -
......................................................................TCTTGTCGTAGTACCCAGAAGAGCAGT......................................................................................................................................................... 27 1 6.00 6.00 2.00 2.00 - - - 1.00 1.00 - - - - - - - - - - - - - - - - - -
...TATGTTATAGTGGACGGTGACTCTG.............................................................................................................................................................................................................................. 25 1 5.00 5.00 - - 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - 1.00 - 1.00 -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGCCt.................................................................................................................................................... 29 t 4.00 97.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................TGAAGTTGTTGAGAACCAAGTCCCTGC.................................................................................................................. 27 1 4.00 4.00 - - 2.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGCCG.................................................................................................................................................... 29 1 4.00 4.00 - - 1.00 1.00 - - - 1.00 - - 1.00 - - - - - - - - - - - - - -
...........................................................................TCGTAGTACCCAGAAGAGCAGTGGCCGA................................................................................................................................................... 28 1 3.00 3.00 2.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGt...................................................................................................................................................... 27 t 3.00 8.00 - - - 1.00 - - - - - - 2.00 - - - - - - - - - - - - - -
..........TAGTGGACGGTGACTCTGCTCGTCTG...................................................................................................................................................................................................................... 26 1 3.00 3.00 - - - - - - - - - 2.00 - - - - - - - - - - 1.00 - - - -
.........................................CGGTTTGGGAACTCAGGAATCTCGCC....................................................................................................................................................................................... 26 1 2.00 2.00 - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - -
......................................................................TCTTGTCGTAGTACCCAGAAGAGCAGTG........................................................................................................................................................ 28 1 2.00 2.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
..........................................................................GTCGTAGTACCCAGAAGAGCAGTGGCC..................................................................................................................................................... 27 1 2.00 2.00 - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................TCTGAAGTTGTTGAGAACCAAGTCCCTG................................................................................................................... 28 1 2.00 2.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................TTGTCGTAGTACCCAGAAGAGCAGTGG....................................................................................................................................................... 27 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................CAGGAATCTCGCCTGCTCTTGTCGTA.......................................................................................................................................................................... 26 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................TTGGGAACTCAGGAATCTCGCCTGC.................................................................................................................................................................................... 25 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...TATGTTATAGTGGACGGTGACTCTGC............................................................................................................................................................................................................................. 26 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................TCTGAAGTTGTTGAGAACCAAGTCCCT.................................................................................................................... 27 1 2.00 2.00 - - 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGCt..................................................................................................................................................... 28 t 1.00 50.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................TTCTTTTCTTTGCCCTGGCTGACCTCGA............................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
.................CGGTGACTCTGCTCGTCTGATCAACGG.............................................................................................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
........TATAGTGGACGGTGAtcta............................................................................................................................................................................................................................... 19 tcta 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
.....................................................................................................................................................................TTTTCTTTGCCCTGGCTGACCTCGAG........................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
.............................................................................GTAGTACCCAGAAGAGCAGTGGCCG.................................................................................................................................................... 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
........................TCTGCTCGTCTGATCAACGGTTTGGG........................................................................................................................................................................................................ 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................CAGTGGCCGAGGAATCTGAAGTTGT.................................................................................................................................... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................TTCTTTGCCCTGGCTGACCTCGAGA.......................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
................................TCTGATCAACGGTTTGGGAACTCAGGA............................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTG........................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..........................TGCTCGTCTGATCAACGGTTTGGGAACT.................................................................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................TGCTCGTCTGATCAACGGTTTGGGAAC..................................................................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGCCGg................................................................................................................................................... 30 g 1.00 4.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TTTGCCCTGGCTGACCTCGAGACAC....................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................TGACTCTGCTCGTCTGATCAACGGTT............................................................................................................................................................................................................ 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................TCTTGTCGTAGTACCCAGAAGAGCA........................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00
...........................................................................TCGTAGTACCCAGAAGAGCAGTGGC...................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...........................................................................TCGTAGTACCCAGAAGAGCAGTGGCCGAG.................................................................................................................................................. 29 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................TGAGAACCAAGTCCCTGCCCTGTGACC......................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................TTGTCGTAGTACCCAGAAGAGCAGTGGCt..................................................................................................................................................... 29 t 1.00 16.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................TCGTAGTACCCAGAAGAGCAGTGGCCG.................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................................................CCGAGGAATCTGAAGTTGTTGAGA............................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...................................................................................................................................................................................................................TGGCCTCAAGTTCAGAGAGATCGGCTTG........... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................TTCTTTTCTTTGCCCTGGCTGACCTCG............................................................. 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.....TGTTATAGTGGACGGTGACTCTtctc........................................................................................................................................................................................................................... 26 tctc 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
.....................................................................CTCTTGTCGTAGTACCCAGAAGAGCAG.......................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................TCGTAGTACCCAGAAGAGCAGTGGCC..................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........TAGTGGACGGTGACTCTGCTCGTCTGAa.................................................................................................................................................................................................................... 28 a 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGgc..................................................................................................................................................... 28 gc 1.00 8.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................TGAAGTTGTTGAGAACCAAGTCCCTG................................................................................................................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................GAAGAGCAGTGGCCGAGGAATCTG........................................................................................................................................... 24 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....TGTTATAGTGGACGGTGACTCTGCT............................................................................................................................................................................................................................ 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.....................................TCAACGGTTTGGGAACTCAGGA............................................................................................................................................................................................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
................................................................................................TGGCCGAGGAATCTGAAGTTGTTGA................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...........................................................................................................TCTGAAGTTGTTGAGAAC............................................................................................................................. 18 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...............................................................................................................................................................TTTTTCTTTTCTTTGCCCTGGCTGACC................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..........TAGTGGACGGTGACTCTGCTCGTC........................................................................................................................................................................................................................ 24 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
.........................................CGGTTTGGGAACTCAGGAATCTCG......................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
...........................................................................................................TCTGAAGTTGTTGAGAACCAAGTCCCTGC.................................................................................................................. 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................TGCTCTTGTCGTAGTACCCAGAAGAG............................................................................................................................................................. 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...TATGTTATAGTGGACGGTGACTCTGCT............................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.........................................................................TGTCGTAGTACCCAGAAGAGCAGTGGCa..................................................................................................................................................... 28 a 1.00 50.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................TCGTAGTACCCAGAAGAGCAGTGGCCGgt.................................................................................................................................................. 29 gt 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................................................................TCTTGTCGTAGTACCCAGAAGAGCAGTGt....................................................................................................................................................... 29 t 1.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................GTAGTACCCAGAAGAGCAGTGGCC..................................................................................................................................................... 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TGCTGGCCTCAAGTTCAGAGAGATC................. 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
GCCTATGTTATAGTGGACGGTGACTCTGCTCGTCTGATCAACGGTTTGGGAACTCAGGAATCTCGCCTGCTCTTGTCGTAGTACCCAGAAGAGCAGTGGCCGAGGAATCTGAAGTTGTTGAGAACCAAGTCCCTGCCCTGTGACCTTGACCCCCAACCCTTTTTCTTTTCTTTGCCCTGGCTGACCTCGAGACACTCTAGGTAGGCCATGCTGGCCTCAAGTTCAGAGAGATCGGCTTGCTTCTGCTTGC
.............................................................(((((((((((((..............)))))))..))).)))..................................................................................................................................................
..................................................51....................................................105...............................................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR014235(GSM319959)
2 dpp total. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)