| Gene: Txndc14 | ID: uc008kix.1_intron_0_0_chr2_84512690_r | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(22) TESTES |
| GGCCGCAGATTGACAAGAAAGGACGAGCTGTCTCTTGGACCTTTTCTGAGGTAGGTGAAACACATGGGCAGTGGTTTGGAGAAAGATACACAACAGTGATTGGGCTTTATTCTTAGTCTGGGTTTAATCCCGAATTCTGACACTGGCCCACTGTTTTTTGAGGATGTAGATTAGTTACAGGATGTCACCTATTAAGTCAGCAGGTTTATGTTATATGCTGCTAATGCTGAGGAAAAATGATAAAGACTTGGTCTGTGAAGTGCCTGTATTCATTCTGTAGCCAATTAGGTTCCTCATCGCTAAACTTGAGTAAGTGGGAGGCAGTACCACCTGGCTCATATTGCTTTACAGTTGCAGGTAGATAGAATTCTTGGCACAATAACTGGCCTCTAGTGAACACTTAAGTATCAGAAAAGAGGTAGGTTAGGGCAGGTCGCTGCCCTCTGACTTACAGGTTGTGCTTAGTTAAATACTTCCTGCTCCTGCTCTCTGAACTTTACCTTCTCACCCAGCCGTTGATGTGTTCATCTCTTTTGCATAGGAGAATGTGATTCGAGAATTCAACTTGAATGAGCTATACCAACGAGCCAA ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................((((.....)))).(((((..((...(((((.((..((..(((......(((.......))).....)))..)).)).))))).....))...)))))................................................... .........................................................................................................................................................................................................................................................................................................................................................................................................................................................442................................................................................................541................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTACAGGTTGTGCTTAGTTAAATACTTCCTGCTCCTGCTCTCTGAACTT.............................................................................................. | 52 | 1 | 31.00 | 31.00 | 31.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......AGATTGACAAGAAAGGACGAGCTGTCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 2 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TGACAAGAAAGGACGAGCTGTCTCTTt.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......AGATTGACAAGAAAGGACGAGCTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | 0.50 | - |
| ................................TCTTGGACCTTTTCTcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | caat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTATCAGAAAAcaac............................................................................................................................................................................ | 18 | caac | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TGAGGATGTAGATTgtag............................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | gtag | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATTCGAGAATTCAACTTGAATGAGC................ | 29 | 2 | 1.00 | 1.00 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| .........................AGCTGTCTCTTGGACCTTTTCTGAGGa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCAACTTGAATGAGCTATACCAAC....... | 28 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | 0.50 | - | - | - | - | - | - |
| .........................................................................................................................................................TTTTTTGAGGATGTAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................TTGGACCTTTTCTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......AGATTGACAAGAAAGGACGAGCTGTCTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 2 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGAATTCAACTTGAATGAGCTAT............. | 26 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATTCGAGAATTCAACTT........................ | 21 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............CAAGAAAGGACGAGCTGTCTCTTGGACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ......AGATTGACAAGAAAGGACGAGCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............ACAAGAAAGGACGAGCTGTCTCTTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ..........TGACAAGAAAGGACGAGCTGTCTCTTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ..CCGCAGATTGACAAGAAAGGACGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCCGCAGATTGACAAGAAAGGACGAGCTGTCTCTTGGACCTTTTCTGAGGTAGGTGAAACACATGGGCAGTGGTTTGGAGAAAGATACACAACAGTGATTGGGCTTTATTCTTAGTCTGGGTTTAATCCCGAATTCTGACACTGGCCCACTGTTTTTTGAGGATGTAGATTAGTTACAGGATGTCACCTATTAAGTCAGCAGGTTTATGTTATATGCTGCTAATGCTGAGGAAAAATGATAAAGACTTGGTCTGTGAAGTGCCTGTATTCATTCTGTAGCCAATTAGGTTCCTCATCGCTAAACTTGAGTAAGTGGGAGGCAGTACCACCTGGCTCATATTGCTTTACAGTTGCAGGTAGATAGAATTCTTGGCACAATAACTGGCCTCTAGTGAACACTTAAGTATCAGAAAAGAGGTAGGTTAGGGCAGGTCGCTGCCCTCTGACTTACAGGTTGTGCTTAGTTAAATACTTCCTGCTCCTGCTCTCTGAACTTTACCTTCTCACCCAGCCGTTGATGTGTTCATCTCTTTTGCATAGGAGAATGTGATTCGAGAATTCAACTTGAATGAGCTATACCAACGAGCCAA ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................((((.....)))).(((((..((...(((((.((..((..(((......(((.......))).....)))..)).)).))))).....))...)))))................................................... .........................................................................................................................................................................................................................................................................................................................................................................................................................................................442................................................................................................541................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................................TGCCTGTATTCATTCTGTAGCCAATTA................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TGACACTGGCCCACTGTTTTTTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TATATGCTGCTAATGCTGAGGAAAAATGA............................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCTGAACTTTACCTTCTCACCCA................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................AATCCCGAATTCTGACACTGGCCCACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACCAACGAGCCggg.. | 18 | ggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTTGATGTGTTCATCTCTTTTGCA..................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACCAACGAGCCg.. | 16 | g | 1.00 | 0.00 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGATGTGTTCATCTCTTTTGCATA................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACCAACGAGCCgggt.. | 19 | gggt | 0.50 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACCAACGAGCCgg.. | 17 | gg | 0.50 | 0.00 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACCAACGAGCC.. | 15 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |