| Gene: Ttn | ID: uc008kfn.1_intron_299_0_chr2_76793146_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(13) TESTES |
| ATGAAGCACAAATTCTTGAAAGAGCTGAGTTATGTTTCTGAGCAATTAACATTGTTATATAACACAAATATTCTACACCTCCCATACCTTTGTCTGTCTGAGTAAGTAAAGGAGCTATCCCAGGAGGCTGTCCCTGGGAGGAGGTGTCCAAGTGTAACTTTGACATTATCAACTACTCACTTGGAAAACCTTGTCTCCAGGTGGGCGTTGGGAAGAAGGCAGAAGCCGTGGCAACAGTTGTAGCTGCTGT ..............................................................................................................((((...(((((((........))))))).(((((.((((((((.....((((.....)))).....))))))))..)))))..)))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................TTTGTCTGTCTGAGTAAGTAAAGGAGC....................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................CGTTGGGAAGAAGGCAGAAGCCGTGGCAACAG............. | 32 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TGGGCGTTGGGAAGA.................................. | 15 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ATGAAGCACAAATTCTTGAAAGAGCTGAGTTATGTTTCTGAGCAATTAACATTGTTATATAACACAAATATTCTACACCTCCCATACCTTTGTCTGTCTGAGTAAGTAAAGGAGCTATCCCAGGAGGCTGTCCCTGGGAGGAGGTGTCCAAGTGTAACTTTGACATTATCAACTACTCACTTGGAAAACCTTGTCTCCAGGTGGGCGTTGGGAAGAAGGCAGAAGCCGTGGCAACAGTTGTAGCTGCTGT ..............................................................................................................((((...(((((((........))))))).(((((.((((((((.....((((.....)))).....))))))))..)))))..)))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................TATTCTACACCTCCCATag..................................................................................................................................................................... | 19 | ag | 32.00 | 0.00 | 13.00 | 10.00 | 5.00 | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - |
| ................................................................TATTCTACACCTCCCATagtg..................................................................................................................................................................... | 21 | agtg | 26.00 | 0.00 | 15.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TATTCTACACCTCCCATagt..................................................................................................................................................................... | 20 | agt | 10.00 | 0.00 | 6.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................TATTCTACACCTCCCATa..................................................................................................................................................................... | 18 | a | 9.00 | 0.00 | 8.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................TATTCTACACCTCCCag....................................................................................................................................................................... | 17 | ag | 8.00 | 0.00 | 5.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TATTCTACACCTCCCagtg....................................................................................................................................................................... | 19 | agtg | 8.00 | 0.00 | 6.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TATTCTACACCTCCCAT..................................................................................................................................................................... | 17 | 1 | 6.00 | 6.00 | 1.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................TATTCTACACCTCCCAag...................................................................................................................................................................... | 18 | ag | 5.00 | 0.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................TATTCTACACCTCCCagt....................................................................................................................................................................... | 18 | agt | 5.00 | 0.00 | 1.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................................TATTCTACACCTCCCAagtg...................................................................................................................................................................... | 20 | agtg | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TATTCTACACCTCCCAagt...................................................................................................................................................................... | 19 | agt | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................AATATTCTACACCTCcaaa......................................................................................................................................................................... | 19 | caaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TATTCTACACCTCCCAa...................................................................................................................................................................... | 17 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................ATATTCTACACCTag.......................................................................................................................................................................... | 15 | ag | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................TATTCTACACCTCCCATgg..................................................................................................................................................................... | 19 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................GAAGGCAGAAGCCGTGGCAACAGTTG.......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................TATTCTACACCTCagcg......................................................................................................................................................................... | 17 | agcg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................TATTCTACACCTCCCa....................................................................................................................................................................... | 16 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |