| Gene: Orc4l | ID: uc008jpp.1_intron_8_0_chr2_48788686_r | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.mut |
(7) TESTES |
| ACTCATGGAAATAGAAGTGAGTGAAAATGTGATACAAGTTCACTTAAATGGTGAGTATATCATTATTTTTCCATTAAGAAACAATGTGAACTAGTTTTGCATATGATGATAATAAATTCATTTGTGTTTTAAGTCTGTCTATATATTAAAAACTGTATGCCTGTTTAATGGCTTTTAGATATTAAAGGAAAGTATATATGGTAAAAGTGTATATTTTCAAATAGTTAAATAGTTTTTTTTTCTTAAATAGTGCCATCTCCAAGGAATGCTTCGATTACCATATTTTTAGAAGAAGTAATATGAAATAGCAATCTGATTATATTCTTTCTAATTAAATTTTTAAAAGCATTAGAAAATACATTTACTTGGAAAATAATCTGTGTCAAATACTTGCTTCTTTTTATTTAGACACCATTAATTGTACTCTGTTTCAGGACTCCTGCAGACAAATGAAAAAATTGCTCTGAAAGAGATCACAAGACAA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................................................................................................................................................................................................................................CACCATTAATTGTACTCTGTTTCAG.................................................. | 25 | 1 | 16.00 | 16.00 | 12.00 | 4.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGACACCATTAATTGTACTCTGTTTCAG.................................................. | 31 | 1 | 14.00 | 14.00 | 14.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGACACCATTAATTGTACTCTGTTTCAGa................................................. | 32 | a | 10.00 | 14.00 | 10.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................ACCATTAATTGTACTCTGTTTCAG.................................................. | 24 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAGACACCATTAATTGTACTCTGTTTCAG.................................................. | 32 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................CATTAATTGTACTCTGTTTCAG.................................................. | 22 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - |
| .......GAAATAGAAGTGAGTGAAAATGTGATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................CCATTAATTGTACTCTGTTTCAG.................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................ACCATTAATTGTACTCTGTTTCA................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - |
| .....TGGAAATAGAAGTGAGTGAAAATGTGATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - |
| ACTCATGGAAATAGAAGTGAGTGAAAATGTGATACAAGTTCACTTAAATGGTGAGTATATCATTATTTTTCCATTAAGAAACAATGTGAACTAGTTTTGCATATGATGATAATAAATTCATTTGTGTTTTAAGTCTGTCTATATATTAAAAACTGTATGCCTGTTTAATGGCTTTTAGATATTAAAGGAAAGTATATATGGTAAAAGTGTATATTTTCAAATAGTTAAATAGTTTTTTTTTCTTAAATAGTGCCATCTCCAAGGAATGCTTCGATTACCATATTTTTAGAAGAAGTAATATGAAATAGCAATCTGATTATATTCTTTCTAATTAAATTTTTAAAAGCATTAGAAAATACATTTACTTGGAAAATAATCTGTGTCAAATACTTGCTTCTTTTTATTTAGACACCATTAATTGTACTCTGTTTCAGGACTCCTGCAGACAAATGAAAAAATTGCTCTGAAAGAGATCACAAGACAA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................................................ATGCTTCGATTActag............................................................................................................................................................................................................... | 16 | ctag | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 |