| Gene: Rabepk | ID: uc008jiu.1_intron_3_0_chr2_34641249_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(13) TESTES |
| TGTCTTATACTGTTTTGTGTTCCTCAGAGACTCAGGTACAAAGGAGACCCTGTCAAGGTCCAGGTCTGCAGAAGTGGATCAGTAGGAGACTGCAAGCCTAGCAGGCCCGGGGTACAGATCCCCAGCACCTCAGAAAACAAAGAGTAAGGACAGAGCCTTAAGCCTAGGTCTTTTAAATGCTTATTTTCTCTCTGGACTAGAAGACAGGACGTGGAGCACACCAGAAGTGACTGGCTCCCCTCCATCCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
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| .................................................................................................................................TCAGAAAACAAAGAGTAAGGACAGAGCCTTAAGCCTAGGTCTTTTAAATGCT..................................................................... | 52 | 1 | 20.00 | 20.00 | 20.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TCTGGACTAGAAGACAGGACGTGGAGCACACCAG.......................... | 34 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................CAGGACGTGGAGCACACCAGAAGTGACTG................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................TGTCAAGGTCCAGGTCTtga.................................................................................................................................................................................... | 20 | tga | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GAAGACAGGACGTGGAGCACACCAGA......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................................................TCCCCAGCACCTCAacca.................................................................................................................. | 18 | acca | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................AAGACAGGACGTGGAGCACACCAGAAGT...................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................AGACAGGACGTGGAGCACACCAGAAG....................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................ACAGGACGTGGAGCACACCAGAAGTGAC................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................AGACAGGACGTGGAGCACACCAGAAGT...................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................AAGACAGGACGTGGAGCACACCAGAAG....................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................AAGACAGGACGTGGAGC................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................GACAGGACGTGGAGCACACCAGAAG....................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................AGTGACTGGCTCCCCTCCATCCC.. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................AGACAGGACGTGGAGCACACCAGAA........................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................GACAGGACGTGGAGCACACCAGAAGT...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| TGTCTTATACTGTTTTGTGTTCCTCAGAGACTCAGGTACAAAGGAGACCCTGTCAAGGTCCAGGTCTGCAGAAGTGGATCAGTAGGAGACTGCAAGCCTAGCAGGCCCGGGGTACAGATCCCCAGCACCTCAGAAAACAAAGAGTAAGGACAGAGCCTTAAGCCTAGGTCTTTTAAATGCTTATTTTCTCTCTGGACTAGAAGACAGGACGTGGAGCACACCAGAAGTGACTGGCTCCCCTCCATCCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
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