| Gene: Abl1 | ID: uc008jec.1_intron_0_0_chr2_31615636_f.5p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| CTGCAAATCCAAGAAGGGGCTCTCTTCGTCCTCCAGCTGCTACCTGGAAGGTAAATCCTGGCCTGGGCGCGGGGCCCACCAGGACTGTCCTGCCCGCCCGTGCCCTGTGTGTTCTAGGTCCCCAGTCTTCTCCCTCTGAGGCCTCTGCGGGTGCTGGTGGCTCATTCGGACTTCCAGAAAGAGAGAGAGAGCCGCGGCTTTGGCGCTGGCGGGGCCCAAGCGCATAGTGTGGCTCCTGCCCAGAAAGTTT ...............................................................................................(((.((((((.....((...(((.((.(((..........))).)))))..))))))))..(((((((.(((...(((.....)))...))).)))))))))).................................................... ...............................................................................................96......................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................TTCGGACTTCCAGAAAGAGAGAGAGAGC.......................................................... | 28 | 1 | 7.00 | 7.00 | - | - | - | 4.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................TTCGGACTTCCAGAAAGAGAGAGAGA............................................................ | 26 | 1 | 4.00 | 4.00 | - | - | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................TCGGACTTCCAGAAAGAGAGAGAGAGC.......................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................TGCTACCTGGAAGGTAAATCCTGGCC........................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................TGCCCTGTGTGTTCTAGGTCCCCAGTC........................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TGTGTGTTCTAGGTCCCCAGTCTTC........................................................................................................................ | 25 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TCCAGAAAGAGAGAGAGAGCCGCGGC.................................................... | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTCGGACTTCCAGAAAGAGAGAGAGAGCC......................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................TGCCCGCCCGTGCCCTGTGTGTTtta...................................................................................................................................... | 26 | tta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................TTCCAGAAAGAGAGAGAGAGCCGCGGC.................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................TTCGGACTTCCAGAAAGAGAGAGAGAG........................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................................................................................GCGCTGGCGGGGCCgggg.............................. | 18 | gggg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......TCCAAGAAGGGGCTCTCTTCGTC............................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......TCCAAGAAGGGGCTCTCTTCGTCCT.......................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................TCTTCGTCCTCCAGCTGCTACCTGGAA......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TCTCCCTCTGAGGCCTCTGCGGGTGC................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TGCCCGCCCGTGCCCTGTGTGTTCT....................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GCCTCTGCGGGTGCTGGTGGCTCATT.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| CTGCAAATCCAAGAAGGGGCTCTCTTCGTCCTCCAGCTGCTACCTGGAAGGTAAATCCTGGCCTGGGCGCGGGGCCCACCAGGACTGTCCTGCCCGCCCGTGCCCTGTGTGTTCTAGGTCCCCAGTCTTCTCCCTCTGAGGCCTCTGCGGGTGCTGGTGGCTCATTCGGACTTCCAGAAAGAGAGAGAGAGCCGCGGCTTTGGCGCTGGCGGGGCCCAAGCGCATAGTGTGGCTCCTGCCCAGAAAGTTT ...............................................................................................(((.((((((.....((...(((.((.(((..........))).)))))..))))))))..(((((((.(((...(((.....)))...))).)))))))))).................................................... ...............................................................................................96......................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................CCTGGAAGGTAAATCCTGGCCTGGGCGCGGGGCCCACCAGGACTGTCCTGCC............................................................................................................................................................ | 52 | 1 | 26.00 | 26.00 | 26.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................CATTCGGACTTCCAGAAAGAGAGAGA.............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CGCCCGTGCCCTGTGTGT.......................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................GCTCTCTTCGTCCTCCAGCTGCTA................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................GCCCTGTGTGTTCTAGGTCCCCAGT............................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................CTAGGTCCCCAGTCTTCTCCCTCTGA............................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................CTGTGTGTTCTAGGTCCCCAGTCTTCT....................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................CTGTGTGTTCTAGGTCCC................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................CCTGTGTGTTCTAGGTCCC................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................GTTCTAGGTCCCCAGTCT.......................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |