| Gene: Crat | ID: uc008jck.1_intron_2_0_chr2_30260111_r | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(15) TESTES |
| CCATAGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTCCACAGTGCCGGTGAGAGGGCTAGAGCAAGGGTGTGTAGACTGAGCTTAGGCCTCTCCTTCCTTTCCTGTTGACTCTCTGCAAATGGATTGTACCTCTATGGTATTTCAGCCCCACTGTGGGCAAAGGGAACTTAACAGAAGATGGAGCCATGAATTTAGTTCTAAGCTTTCTGGCAAAACCATGTATCCGTAAGAGACAAGCCAGTCTCCGTCCACTCATGCAAGTGAGTGCTAGGCTCCAGAGAATGAGGGGATGGGAATGCAGTACTCGCTGTGGTGCCGGGTACAGAGCGAGCTGCTAAGGTGGAAAGGGAGAGGGAGGACAGGGCTTCAGCTTCCTGTCCCCCTCTCCCCCAGGAGCAGCAGAAGGTGGAGCTGCTCCGGAAGGCTGTGCAGGCCCACCGAGC .............................................................................................................................................................................................................................................................................................................((((..((((((.((.(((...))))).)))))))))).....(((...(((((((((.(((((((((....))..)))))))))))))))))))................................................... .........................................................................................................................................................................................................................................................................................................298................................................................................................397................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................CTCTGCAAATGGATTGTACCTCTATGGTATTTCAGCCCCACTGTGGGCAAAG......................................................................................................................................................................................................................................................................................... | 52 | 1 | 28.00 | 28.00 | 28.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGCTGCTCCGGAAGGCTGTGC............. | 25 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............CCTTTGTCAAAGGCATGGGTGACTCCA..................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................TGGGCAAAGGGAACTTAACAGAAGATGGA..................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGTGGAGCTGCTC.......................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCTCCGGAAGGCTGT............... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................GCTTTCTGGCAAAACCATt............................................................................................................................................................................................................................... | 19 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................TGTCAAAGGCATGGGTGACTCCACAGT................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAGGTGGAGCTGCTCCGGAAGGCTGTG.............. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................TGCTAGGCTCCAGAGAATGAGGGGAataa..................................................................................................................................................... | 29 | ataa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................CATGGGTGACTCCACAGTGCCGGagca........................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | agca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........TCGCTGGCCTTTGaaaa...................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | aaaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................CTGTGGGCAAAGGGAcact.................................................................................................................................................................................................................................................................................. | 19 | cact | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGTGGAGCTGCTCCGGAAGGCTGTGCA............ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................TGGAAAGGGAGAGGGgct..................................................................................... | 18 | gct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| CCATAGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTCCACAGTGCCGGTGAGAGGGCTAGAGCAAGGGTGTGTAGACTGAGCTTAGGCCTCTCCTTCCTTTCCTGTTGACTCTCTGCAAATGGATTGTACCTCTATGGTATTTCAGCCCCACTGTGGGCAAAGGGAACTTAACAGAAGATGGAGCCATGAATTTAGTTCTAAGCTTTCTGGCAAAACCATGTATCCGTAAGAGACAAGCCAGTCTCCGTCCACTCATGCAAGTGAGTGCTAGGCTCCAGAGAATGAGGGGATGGGAATGCAGTACTCGCTGTGGTGCCGGGTACAGAGCGAGCTGCTAAGGTGGAAAGGGAGAGGGAGGACAGGGCTTCAGCTTCCTGTCCCCCTCTCCCCCAGGAGCAGCAGAAGGTGGAGCTGCTCCGGAAGGCTGTGCAGGCCCACCGAGC .............................................................................................................................................................................................................................................................................................................((((..((((((.((.(((...))))).)))))))))).....(((...(((((((((.(((((((((....))..)))))))))))))))))))................................................... .........................................................................................................................................................................................................................................................................................................298................................................................................................397................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................TCTCCTTCCTTTCCTGTTGACTCTCTGCA...................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGGAGCTGCTCCGGAAGGCTGTGCA............ | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................CATGCAAGTGAGTGCTAGGCTCCAGAGAA................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................AGCCATGAATTTAGTTCTAAGCTTTCTG.......................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................AAACCATGTATCCGTAAGAGA.................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................................................................................................................AAGCCAGTCTCCGTCCACTCATGCAA....................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |