(1)
OTHER.ip
(8)
OTHER.mut
(1)
OVARY
(6)
PIWI.ip
(1)
PIWI.mut
(29)
TESTES

Sense strand
TACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCGTGAGTATCTTCGCTTCCTGGATGTGAATGTGAGTTTCCGGGCTCTGTGTATCCAGCAGTTACCAGTAAGGGTGGAGGGTTGCATGGGAAGAGATAGCCTAGAGCGGGAGGATGCCTAAGATGCCAACTAAGGCAGGAGTGCTTCTCAGTCTGTGACATTTTTCTATGTGATGGGTAAATGGTCTGGTAATGCCATCCCA
.....................................................................................................(((((((((((((......)))))....)))).))))..((((.(((.(((.(((......))))))...((((......)))).....))))))).....................................................
....................................................................................................101................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR037902(GSM510438)
testes_rep3. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
...................................................TGAGTATCTTCGCTTCCTGGATGTG.............................................................................................................................................................................. 25 1 49.00 49.00 3.00 6.00 6.00 5.00 6.00 7.00 6.00 3.00 - - 1.00 1.00 - - - - 1.00 1.00 - - 1.00 - - 1.00 - - - 1.00 - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGA............................................................................................................................................................................. 26 1 15.00 15.00 3.00 2.00 1.00 3.00 2.00 - - 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGT............................................................................................................................................................................... 24 1 12.00 12.00 - 1.00 2.00 2.00 - - 2.00 1.00 3.00 - - - - - - - - - - - - 1.00 - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAATa.......................................................................................................................................................................... 29 a 12.00 12.00 2.00 2.00 1.00 2.00 2.00 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAAT........................................................................................................................................................................... 28 1 12.00 12.00 2.00 1.00 1.00 - 1.00 1.00 2.00 - - - 2.00 1.00 - - 1.00 - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGt............................................................................................................................................................................. 26 t 5.00 49.00 1.00 - 1.00 - 2.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAA............................................................................................................................................................................ 27 1 4.00 4.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 1.00 - - - - 1.00 - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCCTGG................................................................................................................................................................................... 27 1 3.00 3.00 1.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCCTGGA.................................................................................................................................................................................. 28 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 -
...................................................TGAGTATCTTCGCTTCCTGGATttgt............................................................................................................................................................................. 26 ttgt 2.00 0.00 - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........TGAGCAAGCTTCAGAGCCTGC.......................................................................................................................................................................................................................... 21 1 2.00 2.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGA.................................................................................................................................................................................. 21 1 2.00 2.00 - - - - - - - - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAATt.......................................................................................................................................................................... 29 t 2.00 12.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............AGCAAGCTTCAGAGCCTGCCTGAAGGCTC................................................................................................................................................................................................................ 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........TGAGCAAGCTTCAGAGCCTGCCTGAAGGC.................................................................................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.............AGCAAGCTTCAGAGCCTGCCTGgagt................................................................................................................................................................................................................... 26 gagt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................AGTATCTTCGCTTCCTGGATGTGAATa.......................................................................................................................................................................... 27 a 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTtaa............................................................................................................................................................................ 27 taa 1.00 12.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........TGAGCAAGCTTCAGAGCCTGCCTGAAG.................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........TGAGCAAGCTTCAGAGCCTGCCTGAAtg................................................................................................................................................................................................................... 28 tg 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCCTGGAT................................................................................................................................................................................. 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................GAGTATCTTCGCTTCCTGGATGT............................................................................................................................................................................... 23 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...........TGAGCAAGCTTCAGAGCCTGCCTGAAGGCTC................................................................................................................................................................................................................ 31 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......GACCTGAGCAAGCTTCAGAGCCTG........................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................TCTTCGCTTCCTGGATGTGAATaagg....................................................................................................................................................................... 26 aagg 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................ACTGGGCCGTGAGTATCTTCGCTTCC...................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCCTGGAatt............................................................................................................................................................................... 31 att 1.00 2.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................GAGTATCTTCGCTTCCTGGATGTGA............................................................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.....TCGACCTGAGCAAGCTTCAGAGCCTG........................................................................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAtt........................................................................................................................................................................... 28 tt 1.00 15.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
.......................................................TATCTTCGCTTCCTGGATGTGAATaa......................................................................................................................................................................... 26 aa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAATatt........................................................................................................................................................................ 31 att 1.00 12.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTt.............................................................................................................................................................................. 25 t 1.00 12.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............AGCAAGCTTCAGAGCCTGCCTGAAGGC.................................................................................................................................................................................................................. 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....TCGACCTGAGCAAGCTTCAGAGCCTGCCT........................................................................................................................................................................................................................ 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATtt............................................................................................................................................................................... 24 tt 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATttg.............................................................................................................................................................................. 25 ttg 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................GAGTATCTTCGCTTCCTGGATGTGAATaa......................................................................................................................................................................... 29 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................GTATCTTCGCTTCCTGGATGTGAAT........................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....TCGACCTGAGCAAGCTTCAGAGCCTGCCTGt...................................................................................................................................................................................................................... 31 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCC...................................................................................................................................................................................... 24 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
........ACCTGAGCAAGCTTCAGAGCCTGCCTGA...................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAATat......................................................................................................................................................................... 30 at 1.00 12.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTGAATtt......................................................................................................................................................................... 30 tt 1.00 12.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCCTG.................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGTATCTTCGCTTCCTGGATGTtt............................................................................................................................................................................. 26 tt 1.00 12.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................TGGGCCGTGAGTATCTTCGCTTCCTGGgt................................................................................................................................................................................. 29 gt 1.00 3.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......GACCTGAGCAAGCTTCAGAGCCT............................................................................................................................................................................................................................ 23 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.ACCCTCGACCTGAGCAAGCTTCAGAGCt............................................................................................................................................................................................................................. 28 t 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.............AGCAAGCTTCAGAGCCTGC.......................................................................................................................................................................................................................... 19 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.50

Antisense strand
TACCCTCGACCTGAGCAAGCTTCAGAGCCTGCCTGAAGGCTCACTGGGCCGTGAGTATCTTCGCTTCCTGGATGTGAATGTGAGTTTCCGGGCTCTGTGTATCCAGCAGTTACCAGTAAGGGTGGAGGGTTGCATGGGAAGAGATAGCCTAGAGCGGGAGGATGCCTAAGATGCCAACTAAGGCAGGAGTGCTTCTCAGTCTGTGACATTTTTCTATGTGATGGGTAAATGGTCTGGTAATGCCATCCCA
.....................................................................................................(((((((((((((......)))))....)))).))))..((((.(((.(((.(((......))))))...((((......)))).....))))))).....................................................
....................................................................................................101................................................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
mjTestesWT4()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR037902(GSM510438)
testes_rep3. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
..............................................................................................................................................................................................GCTTCTCAGTCTGTGACATTTTTCTA.................................. 26 1 5.00 5.00 - - - - - - - - - 5.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................GCTCTGTGTATCCAGCAGTTACCAGTAA................................................................................................................................... 28 1 2.00 2.00 - - - - - - - - - - - - 1.00 - - - - - - - - - 1.00 - - - - - - -
.............................................GGGCCGTGAGTATCTTCGCTTCCTGGA.................................................................................................................................................................................. 27 1 2.00 2.00 - - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - -
............................................................................................CTCTGTGTATCCAGCAGTTACCAGTA.................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................GTGCTTCTCAGTCTGTGACATTTTTCTA.................................. 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................................................AGCGGGAGGATGCCTAAGATGCCAACTA...................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................GCTCTGTGTATCCAGCAGTTACCAGTA.................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
......................................................................................................................................................................................GCAGGAGTGCTTCTCAGTCTGTGACA.......................................... 26 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
............................................................................AATGTGAGTTTCCGGGCTCTGTGTATCCA................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -